Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 AC136759.1-202ENST00000530858 2194 ntBASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 AP000356.3-201ENST00000382243 753 ntBASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 RPS9P1-201ENST00000419943 583 ntBASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 AL031713.1-201ENST00000564813 661 ntBASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 AL109837.1-201ENST00000603272 613 ntBASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 AC007718.1-201ENST00000621078 280 ntBASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD4Q5XG99 AC010491.1-201ENST00000563101 2797 ntBASIC14.71□□□□□ -0.06
LYSMD4Q5XG99 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
LYSMD4Q5XG99 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD4Q5XG99 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD4Q5XG99 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.71□□□□□ -0.06
LYSMD4Q5XG99 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.06
LYSMD4Q5XG99 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.06
LYSMD4Q5XG99 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD4Q5XG99 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.71□□□□□ -0.06
LYSMD4Q5XG99 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD4Q5XG99 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 FRMPD2B-201ENST00000431305 1347 ntBASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 OR2K2-202ENST00000374428 1038 ntBASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 AL592076.1-201ENST00000424448 303 ntBASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 RPL7P35-201ENST00000446943 740 ntBASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 AL157813.1-201ENST00000612996 587 ntBASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 AP001065.2-201ENST00000617205 644 ntBASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 CAP2P1-201ENST00000557743 1390 ntBASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LYSMD4Q5XG99 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LYSMD4Q5XG99 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms