Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
RIF1Q5UIP0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 RN7SL23P-201ENST00000484055 275 ntBASIC14.41□□□□□ -0.1
RIF1Q5UIP0 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 AC026434.2-201ENST00000506094 1078 ntBASIC14.41□□□□□ -0.1
RIF1Q5UIP0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIF1Q5UIP0 AC012508.2-201ENST00000567613 1472 ntBASIC14.41□□□□□ -0.1
RIF1Q5UIP0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 NQO2-204ENST00000380454 851 ntTSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 DKKL1P1-201ENST00000400550 698 ntBASIC14.4□□□□□ -0.1
RIF1Q5UIP0 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 AL138725.1-201ENST00000407347 1314 ntBASIC14.4□□□□□ -0.1
RIF1Q5UIP0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 AC092580.1-201ENST00000433998 658 ntBASIC14.4□□□□□ -0.1
RIF1Q5UIP0 RN7SL357P-201ENST00000581065 298 ntBASIC14.4□□□□□ -0.1
RIF1Q5UIP0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 AC010976.2-201ENST00000609697 852 ntBASIC14.4□□□□□ -0.1
RIF1Q5UIP0 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 WASH3P-207ENST00000560956 1394 ntBASIC14.4□□□□□ -0.1
RIF1Q5UIP0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RIF1Q5UIP0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC14.39□□□□□ -0.11
RIF1Q5UIP0 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms