Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 HSPB1P2-201ENST00000448722 546 ntBASIC20.74■□□□□ 0.91
CDCA8Q53HL2 AL591846.1-201ENST00000451736 433 ntBASIC20.74■□□□□ 0.91
CDCA8Q53HL2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 RN7SL219P-201ENST00000582872 296 ntBASIC20.74■□□□□ 0.91
CDCA8Q53HL2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 AL358472.3-201ENST00000608147 415 ntBASIC20.74■□□□□ 0.91
CDCA8Q53HL2 AC091271.1-201ENST00000611877 1162 ntBASIC20.74■□□□□ 0.91
CDCA8Q53HL2 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 AC020910.5-201ENST00000623668 1865 ntBASIC20.74■□□□□ 0.91
CDCA8Q53HL2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDCA8Q53HL2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 LINC01101-201ENST00000622953 1884 ntBASIC20.73■□□□□ 0.91
CDCA8Q53HL2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 GCOM2-201ENST00000509133 1104 ntBASIC20.73■□□□□ 0.91
CDCA8Q53HL2 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 MIR4683-201ENST00000579659 81 ntBASIC20.73■□□□□ 0.91
CDCA8Q53HL2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 MIR6869-201ENST00000619434 62 ntBASIC20.73■□□□□ 0.91
CDCA8Q53HL2 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 AP001002.3-201ENST00000623482 206 ntBASIC20.73■□□□□ 0.91
CDCA8Q53HL2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 AC009093.2-202ENST00000620513 2079 ntBASIC20.73■□□□□ 0.91
CDCA8Q53HL2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDCA8Q53HL2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 AC010141.1-201ENST00000411585 623 ntBASIC20.72■□□□□ 0.91
CDCA8Q53HL2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.72■□□□□ 0.91
CDCA8Q53HL2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CDCA8Q53HL2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms