Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 LINC02084-201ENST00000606069 1096 ntBASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 AL358472.5-202ENST00000641448 1267 ntBASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN20Q4JDL3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 AC067930.6-201ENST00000623257 4947 ntBASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 PKD1P5-201ENST00000532415 10291 ntBASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 NME2P1-201ENST00000426182 414 ntBASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 TTTY23B-201ENST00000442790 549 ntBASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 AC015936.2-201ENST00000593177 259 ntBASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN20Q4JDL3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN20Q4JDL3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms