Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHRFAM7AQ494W8 REXO1L6P-201ENST00000603433 1515 ntBASIC13.38□□□□□ -0.27
CHRFAM7AQ494W8 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRFAM7AQ494W8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRFAM7AQ494W8 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHRFAM7AQ494W8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 AC018892.3-201ENST00000623986 2499 ntBASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CHRFAM7AQ494W8 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 AC232323.1-201ENST00000540724 2099 ntBASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 REXO1L5P-201ENST00000622260 2098 ntBASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 FOXO1B-201ENST00000504678 1527 ntBASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 AC044860.1-202ENST00000559481 777 ntBASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 RN7SL219P-201ENST00000582872 296 ntBASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CHRFAM7AQ494W8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms