Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 AC003102.2-201ENST00000589195 1469 ntBASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 AC013268.4-201ENST00000637413 2228 ntBASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 AC126755.1-201ENST00000525846 6405 ntBASIC16.3■□□□□ 0.2
DCAF4L1Q3SXM0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 MIR663B-201ENST00000408361 115 ntBASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 MIR4683-201ENST00000579659 81 ntBASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 AL096828.3-201ENST00000615354 462 ntBASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 AP001002.3-201ENST00000623482 206 ntBASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 ACE3P-201ENST00000423435 1973 ntBASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 INE2-201ENST00000630399 1874 ntBASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DCAF4L1Q3SXM0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 FAM8A2P-201ENST00000528813 1142 ntBASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.28■□□□□ 0.2
DCAF4L1Q3SXM0 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms