Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.88□□□□□ -0.19
LTBQ06643 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.88□□□□□ -0.19
LTBQ06643 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.88□□□□□ -0.19
LTBQ06643 BCYRN1-201ENST00000418539 200 ntBASIC13.88□□□□□ -0.19
LTBQ06643 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 GNAQP1-201ENST00000444815 1067 ntBASIC13.88□□□□□ -0.19
LTBQ06643 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.88□□□□□ -0.19
LTBQ06643 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
LTBQ06643 RARRES2P5-201ENST00000564013 466 ntBASIC13.88□□□□□ -0.19
LTBQ06643 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.88□□□□□ -0.19
LTBQ06643 TMEM261P1-201ENST00000604899 340 ntBASIC13.88□□□□□ -0.19
LTBQ06643 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.88□□□□□ -0.19
LTBQ06643 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.88□□□□□ -0.19
LTBQ06643 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.88□□□□□ -0.19
LTBQ06643 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.88□□□□□ -0.19
LTBQ06643 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LTBQ06643 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LTBQ06643 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LTBQ06643 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LTBQ06643 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LTBQ06643 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBQ06643 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 AC012508.2-201ENST00000567613 1472 ntBASIC13.87□□□□□ -0.19
LTBQ06643 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.87□□□□□ -0.19
LTBQ06643 AC005089.1-201ENST00000619486 2241 ntBASIC13.87□□□□□ -0.19
LTBQ06643 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.87□□□□□ -0.19
LTBQ06643 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LTBQ06643 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.87□□□□□ -0.19
LTBQ06643 DOC2GP-202ENST00000514950 1163 ntBASIC13.87□□□□□ -0.19
LTBQ06643 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.87□□□□□ -0.19
LTBQ06643 SAMD11P1-201ENST00000571429 661 ntBASIC13.87□□□□□ -0.19
LTBQ06643 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.87□□□□□ -0.19
LTBQ06643 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
LTBQ06643 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LTBQ06643 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LTBQ06643 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms