Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CALD1Q05682 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.66■□□□□ 0.74
CALD1Q05682 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CALD1Q05682 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 NOP2-220ENST00000545915 630 ntTSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.66■□□□□ 0.74
CALD1Q05682 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.66■□□□□ 0.74
CALD1Q05682 AC133552.6-201ENST00000613406 534 ntBASIC19.66■□□□□ 0.74
CALD1Q05682 MIR6775-201ENST00000617557 69 ntBASIC19.66■□□□□ 0.74
CALD1Q05682 WNT11-204ENST00000621122 789 ntTSL 5 BASIC19.66■□□□□ 0.74
CALD1Q05682 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC19.66■□□□□ 0.74
CALD1Q05682 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CALD1Q05682 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC19.66■□□□□ 0.74
CALD1Q05682 AC023090.2-201ENST00000625182 2110 ntBASIC19.66■□□□□ 0.74
CALD1Q05682 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CALD1Q05682 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CALD1Q05682 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CALD1Q05682 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CALD1Q05682 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.65■□□□□ 0.74
CALD1Q05682 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 AL590640.2-201ENST00000457038 527 ntBASIC19.65■□□□□ 0.74
CALD1Q05682 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CALD1Q05682 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.65■□□□□ 0.74
CALD1Q05682 SNX29P1-201ENST00000548357 1007 ntBASIC19.65■□□□□ 0.74
CALD1Q05682 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.65■□□□□ 0.74
CALD1Q05682 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.65■□□□□ 0.74
CALD1Q05682 COX11-210ENST00000639671 696 ntBASIC19.65■□□□□ 0.74
CALD1Q05682 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CALD1Q05682 CLUHP2-201ENST00000426660 1303 ntBASIC19.65■□□□□ 0.74
CALD1Q05682 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CALD1Q05682 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CALD1Q05682 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.65■□□□□ 0.74
CALD1Q05682 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CALD1Q05682 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CALD1Q05682 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.64■□□□□ 0.74
CALD1Q05682 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CALD1Q05682 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALD1Q05682 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALD1Q05682 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CALD1Q05682 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CALD1Q05682 ANKRD19P-201ENST00000338192 862 ntBASIC19.64■□□□□ 0.73
CALD1Q05682 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.64■□□□□ 0.73
CALD1Q05682 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CALD1Q05682 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.64■□□□□ 0.73
CALD1Q05682 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.64■□□□□ 0.73
CALD1Q05682 AC023310.1-201ENST00000554836 735 ntBASIC19.64■□□□□ 0.73
CALD1Q05682 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.64■□□□□ 0.73
CALD1Q05682 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.64■□□□□ 0.73
CALD1Q05682 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CALD1Q05682 AC004466.1-201ENST00000599515 1080 ntBASIC19.64■□□□□ 0.73
CALD1Q05682 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.64■□□□□ 0.73
CALD1Q05682 AC008687.7-202ENST00000637404 953 ntBASIC19.64■□□□□ 0.73
CALD1Q05682 AHCYP2-201ENST00000430630 1300 ntBASIC19.64■□□□□ 0.73
CALD1Q05682 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CALD1Q05682 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms