Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 USP32P1-208ENST00000506594 1164 ntBASIC14.42□□□□□ -0.1
SKP1P63208 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.42□□□□□ -0.1
SKP1P63208 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.42□□□□□ -0.1
SKP1P63208 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.42□□□□□ -0.1
SKP1P63208 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.42□□□□□ -0.1
SKP1P63208 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.42□□□□□ -0.1
SKP1P63208 RN7SL48P-201ENST00000579283 293 ntBASIC14.42□□□□□ -0.1
SKP1P63208 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.42□□□□□ -0.1
SKP1P63208 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.42□□□□□ -0.1
SKP1P63208 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SKP1P63208 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SKP1P63208 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SKP1P63208 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SKP1P63208 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SKP1P63208 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.41□□□□□ -0.1
SKP1P63208 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 AC023824.1-201ENST00000562945 2975 ntBASIC14.41□□□□□ -0.1
SKP1P63208 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SKP1P63208 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SKP1P63208 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SKP1P63208 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
SKP1P63208 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 AC016694.1-201ENST00000434179 700 ntBASIC14.41□□□□□ -0.1
SKP1P63208 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.41□□□□□ -0.1
SKP1P63208 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.41□□□□□ -0.1
SKP1P63208 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.41□□□□□ -0.1
SKP1P63208 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.41□□□□□ -0.1
SKP1P63208 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.41□□□□□ -0.1
SKP1P63208 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.41□□□□□ -0.1
SKP1P63208 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SKP1P63208 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.41□□□□□ -0.1
SKP1P63208 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 AC132938.4-201ENST00000623835 848 ntBASIC14.41□□□□□ -0.1
SKP1P63208 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 AC006486.2-201ENST00000624246 2199 ntBASIC14.41□□□□□ -0.1
SKP1P63208 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.41□□□□□ -0.1
SKP1P63208 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.41□□□□□ -0.1
SKP1P63208 AC126177.1-201ENST00000547829 2218 ntBASIC14.41□□□□□ -0.1
SKP1P63208 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.41□□□□□ -0.1
SKP1P63208 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SKP1P63208 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.41□□□□□ -0.1
SKP1P63208 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.41□□□□□ -0.1
SKP1P63208 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SKP1P63208 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.4□□□□□ -0.1
SKP1P63208 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SKP1P63208 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SKP1P63208 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SKP1P63208 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SKP1P63208 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms