Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CYGB-205ENST00000590175 830 ntTSL 3 BASIC10.74□□□□□ -0.69
CKS1BP61024 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC10.74□□□□□ -0.69
CKS1BP61024 CLEC4GP1-201ENST00000596555 870 ntBASIC10.74□□□□□ -0.69
CKS1BP61024 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC10.74□□□□□ -0.69
CKS1BP61024 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 RELA-227ENST00000615805 2236 ntTSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CKS1BP61024 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.74□□□□□ -0.69
CKS1BP61024 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CKS1BP61024 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC10.73□□□□□ -0.69
CKS1BP61024 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.73□□□□□ -0.69
CKS1BP61024 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC10.73□□□□□ -0.69
CKS1BP61024 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC10.73□□□□□ -0.69
CKS1BP61024 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 HERC2P10-201ENST00000570209 2393 ntBASIC10.73□□□□□ -0.69
CKS1BP61024 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CKS1BP61024 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CKS1BP61024 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CKS1BP61024 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC10.73□□□□□ -0.69
CKS1BP61024 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC10.73□□□□□ -0.69
CKS1BP61024 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC10.73□□□□□ -0.69
CKS1BP61024 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 PAM16-208ENST00000573553 722 ntTSL 2 BASIC10.73□□□□□ -0.69
CKS1BP61024 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.73□□□□□ -0.69
CKS1BP61024 ACTL9-202ENST00000612068 1252 ntBASIC10.73□□□□□ -0.69
CKS1BP61024 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 PMS2P7-201ENST00000506558 1336 ntBASIC10.73□□□□□ -0.69
CKS1BP61024 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.73□□□□□ -0.69
CKS1BP61024 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
CKS1BP61024 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
CKS1BP61024 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
CKS1BP61024 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC10.73□□□□□ -0.69
CKS1BP61024 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.73□□□□□ -0.69
CKS1BP61024 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CKS1BP61024 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC10.72□□□□□ -0.69
CKS1BP61024 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS1BP61024 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS1BP61024 LSINCT5-201ENST00000626215 2647 ntBASIC10.72□□□□□ -0.69
CKS1BP61024 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC10.72□□□□□ -0.69
CKS1BP61024 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS1BP61024 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS1BP61024 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC10.72□□□□□ -0.69
CKS1BP61024 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CKS1BP61024 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms