Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDH13P55290 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH13P55290 AC027601.5-201ENST00000624065 2482 ntBASIC14.87□□□□□ -0.03
CDH13P55290 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH13P55290 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDH13P55290 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH13P55290 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH13P55290 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH13P55290 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.87□□□□□ -0.03
CDH13P55290 AC009477.1-201ENST00000452936 217 ntBASIC14.87□□□□□ -0.03
CDH13P55290 AC004066.1-201ENST00000502488 802 ntBASIC14.87□□□□□ -0.03
CDH13P55290 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.87□□□□□ -0.03
CDH13P55290 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.87□□□□□ -0.03
CDH13P55290 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH13P55290 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH13P55290 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CDH13P55290 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH13P55290 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
CDH13P55290 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH13P55290 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDH13P55290 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH13P55290 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.87□□□□□ -0.03
CDH13P55290 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH13P55290 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.87□□□□□ -0.03
CDH13P55290 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDH13P55290 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDH13P55290 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH13P55290 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CDH13P55290 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CDH13P55290 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH13P55290 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH13P55290 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CDH13P55290 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.86□□□□□ -0.03
CDH13P55290 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH13P55290 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH13P55290 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.86□□□□□ -0.03
CDH13P55290 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.86□□□□□ -0.03
CDH13P55290 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDH13P55290 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
CDH13P55290 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDH13P55290 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDH13P55290 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH13P55290 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CDH13P55290 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH13P55290 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CDH13P55290 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms