Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.05■□□□□ 0.32
USP11P51784 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.05■□□□□ 0.32
USP11P51784 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
USP11P51784 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
USP11P51784 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.05■□□□□ 0.32
USP11P51784 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 RN7SKP230-201ENST00000365642 335 ntBASIC17.05■□□□□ 0.32
USP11P51784 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.05■□□□□ 0.32
USP11P51784 C2orf69P2-201ENST00000562032 1123 ntBASIC17.05■□□□□ 0.32
USP11P51784 DUX4L45-201ENST00000566406 1057 ntBASIC17.05■□□□□ 0.32
USP11P51784 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.05■□□□□ 0.32
USP11P51784 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.05■□□□□ 0.32
USP11P51784 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
USP11P51784 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.05■□□□□ 0.32
USP11P51784 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
USP11P51784 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 AL354989.2-201ENST00000435838 1540 ntBASIC17.05■□□□□ 0.32
USP11P51784 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.05■□□□□ 0.32
USP11P51784 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
USP11P51784 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.05■□□□□ 0.32
USP11P51784 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
USP11P51784 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
USP11P51784 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.04■□□□□ 0.32
USP11P51784 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.04■□□□□ 0.32
USP11P51784 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.04■□□□□ 0.32
USP11P51784 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.04■□□□□ 0.32
USP11P51784 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 AL391280.1-201ENST00000506969 1062 ntBASIC17.04■□□□□ 0.32
USP11P51784 RNA5SP412-201ENST00000516234 123 ntBASIC17.04■□□□□ 0.32
USP11P51784 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.04■□□□□ 0.32
USP11P51784 AP003171.2-201ENST00000528208 925 ntBASIC17.04■□□□□ 0.32
USP11P51784 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.04■□□□□ 0.32
USP11P51784 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.04■□□□□ 0.32
USP11P51784 RN7SL713P-201ENST00000582127 302 ntBASIC17.04■□□□□ 0.32
USP11P51784 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.04■□□□□ 0.32
USP11P51784 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.04■□□□□ 0.32
USP11P51784 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.04■□□□□ 0.32
USP11P51784 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
USP11P51784 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.04■□□□□ 0.32
USP11P51784 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
USP11P51784 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.04■□□□□ 0.32
USP11P51784 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
USP11P51784 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.03■□□□□ 0.32
USP11P51784 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.03■□□□□ 0.32
USP11P51784 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
USP11P51784 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.03■□□□□ 0.32
USP11P51784 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.03■□□□□ 0.32
USP11P51784 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 COX5BP1-201ENST00000507622 393 ntBASIC17.03■□□□□ 0.32
USP11P51784 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.03■□□□□ 0.32
USP11P51784 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.03■□□□□ 0.32
USP11P51784 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.03■□□□□ 0.32
USP11P51784 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
USP11P51784 OR10B1P-201ENST00000601666 907 ntBASIC17.03■□□□□ 0.32
USP11P51784 AL008721.1-201ENST00000609964 604 ntBASIC17.03■□□□□ 0.32
USP11P51784 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.03■□□□□ 0.32
USP11P51784 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms