Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 WASH4P-201ENST00000564273 1246 ntBASIC13.53□□□□□ -0.24
CSNK1A1P48729 TP53TG3HP-202ENST00000569755 579 ntBASIC13.53□□□□□ -0.24
CSNK1A1P48729 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSNK1A1P48729 LINC01101-201ENST00000622953 1884 ntBASIC13.53□□□□□ -0.24
CSNK1A1P48729 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.53□□□□□ -0.24
CSNK1A1P48729 AL157414.3-201ENST00000624276 1954 ntBASIC13.52□□□□□ -0.24
CSNK1A1P48729 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1A1P48729 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1A1P48729 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
CSNK1A1P48729 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1A1P48729 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1A1P48729 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1A1P48729 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1A1P48729 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CSNK1A1P48729 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
CSNK1A1P48729 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSNK1A1P48729 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
CSNK1A1P48729 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.52□□□□□ -0.25
CSNK1A1P48729 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 CRB3P1-201ENST00000449338 276 ntBASIC13.52□□□□□ -0.25
CSNK1A1P48729 ENPP7P5-201ENST00000541031 1031 ntBASIC13.52□□□□□ -0.25
CSNK1A1P48729 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 CTBP2P3-201ENST00000585629 1255 ntBASIC13.52□□□□□ -0.25
CSNK1A1P48729 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 REXO1L5P-201ENST00000622260 2098 ntBASIC13.52□□□□□ -0.25
CSNK1A1P48729 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 AC013726.1-201ENST00000563747 2285 ntBASIC13.52□□□□□ -0.25
CSNK1A1P48729 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CSNK1A1P48729 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSNK1A1P48729 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms