Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.29□□□□□ -0.12
GABRA4P48169 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 ZNF767P-206ENST00000513792 565 ntBASIC14.29□□□□□ -0.12
GABRA4P48169 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.29□□□□□ -0.12
GABRA4P48169 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.29□□□□□ -0.12
GABRA4P48169 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
GABRA4P48169 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 AL358472.3-201ENST00000608147 415 ntBASIC14.29□□□□□ -0.12
GABRA4P48169 AC244157.2-201ENST00000616239 1006 ntBASIC14.29□□□□□ -0.12
GABRA4P48169 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.29□□□□□ -0.12
GABRA4P48169 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
GABRA4P48169 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 AC020910.5-201ENST00000623668 1865 ntBASIC14.29□□□□□ -0.12
GABRA4P48169 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.29□□□□□ -0.12
GABRA4P48169 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
GABRA4P48169 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
GABRA4P48169 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
GABRA4P48169 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
GABRA4P48169 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.28□□□□□ -0.12
GABRA4P48169 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GABRA4P48169 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.28□□□□□ -0.12
GABRA4P48169 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.28□□□□□ -0.12
GABRA4P48169 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
GABRA4P48169 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.28□□□□□ -0.12
GABRA4P48169 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 AC100850.1-201ENST00000506768 649 ntBASIC14.28□□□□□ -0.12
GABRA4P48169 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.28□□□□□ -0.12
GABRA4P48169 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
GABRA4P48169 AC126177.1-201ENST00000547829 2218 ntBASIC14.28□□□□□ -0.12
GABRA4P48169 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.28□□□□□ -0.12
GABRA4P48169 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
GABRA4P48169 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.28□□□□□ -0.12
GABRA4P48169 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.28□□□□□ -0.12
GABRA4P48169 AP001002.3-201ENST00000623482 206 ntBASIC14.28□□□□□ -0.12
GABRA4P48169 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.28□□□□□ -0.12
GABRA4P48169 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
GABRA4P48169 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
GABRA4P48169 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
GABRA4P48169 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.28□□□□□ -0.12
GABRA4P48169 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.27□□□□□ -0.12
GABRA4P48169 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.27□□□□□ -0.12
GABRA4P48169 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
GABRA4P48169 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABRA4P48169 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABRA4P48169 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABRA4P48169 AC063926.3-201ENST00000624734 5658 ntBASIC14.27□□□□□ -0.12
GABRA4P48169 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABRA4P48169 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.27□□□□□ -0.12
GABRA4P48169 AC018735.1-201ENST00000437208 1502 ntBASIC14.27□□□□□ -0.12
GABRA4P48169 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.27□□□□□ -0.12
GABRA4P48169 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABRA4P48169 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
GABRA4P48169 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
GABRA4P48169 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.27□□□□□ -0.12
GABRA4P48169 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
GABRA4P48169 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
GABRA4P48169 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.27□□□□□ -0.13
GABRA4P48169 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GABRA4P48169 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.27□□□□□ -0.13
GABRA4P48169 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms