Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP13P45452 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.79■□□□□ 0.12
MMP13P45452 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.79■□□□□ 0.12
MMP13P45452 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 AC092135.3-201ENST00000624151 1846 ntBASIC15.79■□□□□ 0.12
MMP13P45452 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.79■□□□□ 0.12
MMP13P45452 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
MMP13P45452 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.79■□□□□ 0.12
MMP13P45452 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MMP13P45452 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
MMP13P45452 MBLAC2-202ENST00000514906 1936 ntBASIC15.78■□□□□ 0.12
MMP13P45452 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 INTS4P1-203ENST00000641008 3683 ntBASIC15.78■□□□□ 0.12
MMP13P45452 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP13P45452 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
MMP13P45452 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
MMP13P45452 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
MMP13P45452 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP13P45452 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP13P45452 AL353779.1-201ENST00000434793 351 ntBASIC15.78■□□□□ 0.12
MMP13P45452 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.78■□□□□ 0.12
MMP13P45452 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.78■□□□□ 0.12
MMP13P45452 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
MMP13P45452 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP13P45452 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP13P45452 AC093726.1-201ENST00000608064 963 ntBASIC15.78■□□□□ 0.12
MMP13P45452 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.78■□□□□ 0.12
MMP13P45452 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.78■□□□□ 0.12
MMP13P45452 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.78■□□□□ 0.12
MMP13P45452 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.78■□□□□ 0.12
MMP13P45452 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 AC079781.5-202ENST00000641784 3743 ntBASIC15.78■□□□□ 0.12
MMP13P45452 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MMP13P45452 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.78■□□□□ 0.12
MMP13P45452 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.78■□□□□ 0.12
MMP13P45452 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP13P45452 CICP11-201ENST00000434745 2827 ntBASIC15.77■□□□□ 0.12
MMP13P45452 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 AP001267.2-201ENST00000532619 2086 ntBASIC15.77■□□□□ 0.12
MMP13P45452 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
MMP13P45452 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP13P45452 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP13P45452 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.77■□□□□ 0.12
MMP13P45452 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
MMP13P45452 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
MMP13P45452 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
MMP13P45452 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
MMP13P45452 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP13P45452 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.77■□□□□ 0.12
MMP13P45452 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP13P45452 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP13P45452 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP13P45452 AC123567.1-201ENST00000548294 1261 ntBASIC15.77■□□□□ 0.12
MMP13P45452 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP13P45452 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP13P45452 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.77■□□□□ 0.12
MMP13P45452 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP13P45452 AL049840.4-201ENST00000602422 811 ntBASIC15.77■□□□□ 0.12
MMP13P45452 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MMP13P45452 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP13P45452 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms