Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 AC105250.1-201ENST00000509378 2057 ntBASIC13.93□□□□□ -0.18
RFC3P40938 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
RFC3P40938 AL137784.3-201ENST00000623858 2288 ntBASIC13.93□□□□□ -0.18
RFC3P40938 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RFC3P40938 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RFC3P40938 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.92□□□□□ -0.18
RFC3P40938 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.92□□□□□ -0.18
RFC3P40938 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.92□□□□□ -0.18
RFC3P40938 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.92□□□□□ -0.18
RFC3P40938 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.92□□□□□ -0.18
RFC3P40938 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.92□□□□□ -0.18
RFC3P40938 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
RFC3P40938 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 ACTBP8-201ENST00000403258 1108 ntBASIC13.92□□□□□ -0.18
RFC3P40938 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.92□□□□□ -0.18
RFC3P40938 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.92□□□□□ -0.18
RFC3P40938 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.92□□□□□ -0.18
RFC3P40938 AC114812.1-204ENST00000449669 728 ntBASIC13.92□□□□□ -0.18
RFC3P40938 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RFC3P40938 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.92□□□□□ -0.18
RFC3P40938 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RFC3P40938 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RFC3P40938 AC079316.1-201ENST00000548397 411 ntBASIC13.92□□□□□ -0.18
RFC3P40938 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.92□□□□□ -0.18
RFC3P40938 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.92□□□□□ -0.18
RFC3P40938 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RFC3P40938 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
RFC3P40938 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.92□□□□□ -0.18
RFC3P40938 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
RFC3P40938 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.92□□□□□ -0.18
RFC3P40938 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RFC3P40938 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.92□□□□□ -0.18
RFC3P40938 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.91□□□□□ -0.18
RFC3P40938 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RFC3P40938 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RFC3P40938 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.91□□□□□ -0.18
RFC3P40938 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
RFC3P40938 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RFC3P40938 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RFC3P40938 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.91□□□□□ -0.18
RFC3P40938 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RFC3P40938 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 AC108725.1-201ENST00000495472 409 ntBASIC13.91□□□□□ -0.18
RFC3P40938 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.91□□□□□ -0.18
RFC3P40938 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.91□□□□□ -0.18
RFC3P40938 RN7SL560P-201ENST00000577943 264 ntBASIC13.91□□□□□ -0.18
RFC3P40938 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RFC3P40938 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RFC3P40938 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms