Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.05■□□□□ -0
HMGCLP35914 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.05■□□□□ -0
HMGCLP35914 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.05■□□□□ -0
HMGCLP35914 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
HMGCLP35914 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 AC018529.2-202ENST00000611482 3087 ntBASIC15.05■□□□□ -0
HMGCLP35914 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.05■□□□□ -0
HMGCLP35914 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.04■□□□□ -0
HMGCLP35914 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.04■□□□□ -0
HMGCLP35914 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HMGCLP35914 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.04■□□□□ -0
HMGCLP35914 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HMGCLP35914 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.04■□□□□ -0
HMGCLP35914 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HMGCLP35914 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.04■□□□□ -0
HMGCLP35914 CD8B2-202ENST00000417670 633 ntBASIC15.04■□□□□ -0
HMGCLP35914 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HMGCLP35914 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.04■□□□□ -0
HMGCLP35914 CNN2P8-201ENST00000421872 913 ntBASIC15.04■□□□□ -0
HMGCLP35914 TLE1P1-201ENST00000422965 589 ntBASIC15.04■□□□□ -0
HMGCLP35914 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.04■□□□□ -0
HMGCLP35914 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.04■□□□□ -0
HMGCLP35914 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
HMGCLP35914 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
HMGCLP35914 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.04■□□□□ -0
HMGCLP35914 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.04■□□□□ -0
HMGCLP35914 RNA5SP486-201ENST00000515961 83 ntBASIC15.04■□□□□ -0
HMGCLP35914 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.04■□□□□ -0
HMGCLP35914 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.04■□□□□ -0
HMGCLP35914 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.04■□□□□ -0
HMGCLP35914 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.04■□□□□ -0
HMGCLP35914 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.04■□□□□ -0
HMGCLP35914 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.04■□□□□ -0
HMGCLP35914 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
HMGCLP35914 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.04■□□□□ -0
HMGCLP35914 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.04■□□□□ -0
HMGCLP35914 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.03■□□□□ -0
HMGCLP35914 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
HMGCLP35914 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.03■□□□□ -0
HMGCLP35914 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.03■□□□□ -0
HMGCLP35914 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.03■□□□□ -0
HMGCLP35914 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 TPM3P8-201ENST00000330554 643 ntBASIC15.03■□□□□ -0
HMGCLP35914 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.03■□□□□ -0
HMGCLP35914 BOLA2P3-201ENST00000404566 256 ntBASIC15.03■□□□□ -0
HMGCLP35914 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.03■□□□□ -0
HMGCLP35914 U91328.1-201ENST00000437528 223 ntBASIC15.03■□□□□ -0
HMGCLP35914 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 MESTP3-201ENST00000503460 968 ntBASIC15.03■□□□□ -0
HMGCLP35914 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.03■□□□□ -0
HMGCLP35914 KRT17P8-201ENST00000540749 863 ntBASIC15.03■□□□□ -0
HMGCLP35914 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.03■□□□□ -0
HMGCLP35914 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.03■□□□□ -0
HMGCLP35914 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HMGCLP35914 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.03■□□□□ -0
HMGCLP35914 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
HMGCLP35914 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.03■□□□□ -0
HMGCLP35914 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms