Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC011462.4-201ENST00000616866 449 ntBASIC20.78■□□□□ 0.92
CPS1P31327 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC20.78■□□□□ 0.92
CPS1P31327 LTB4R2-202ENST00000528054 3092 ntBASIC20.78■□□□□ 0.92
CPS1P31327 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPS1P31327 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPS1P31327 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CPS1P31327 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPS1P31327 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPS1P31327 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPS1P31327 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC20.77■□□□□ 0.92
CPS1P31327 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC20.77■□□□□ 0.92
CPS1P31327 OR51A9P-201ENST00000422578 911 ntBASIC20.77■□□□□ 0.92
CPS1P31327 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC20.77■□□□□ 0.92
CPS1P31327 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPS1P31327 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC20.77■□□□□ 0.92
CPS1P31327 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC20.77■□□□□ 0.92
CPS1P31327 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.77■□□□□ 0.92
CPS1P31327 AC068867.1-201ENST00000559855 150 ntBASIC20.77■□□□□ 0.92
CPS1P31327 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC20.77■□□□□ 0.92
CPS1P31327 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CPS1P31327 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC20.77■□□□□ 0.92
CPS1P31327 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC20.77■□□□□ 0.92
CPS1P31327 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
CPS1P31327 AC021305.1-201ENST00000520656 1514 ntBASIC20.77■□□□□ 0.92
CPS1P31327 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPS1P31327 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPS1P31327 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
CPS1P31327 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.77■□□□□ 0.91
CPS1P31327 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPS1P31327 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC20.77■□□□□ 0.91
CPS1P31327 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPS1P31327 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CPS1P31327 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CPS1P31327 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPS1P31327 AL118508.1-201ENST00000613502 2345 ntBASIC20.76■□□□□ 0.91
CPS1P31327 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CPS1P31327 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC20.76■□□□□ 0.91
CPS1P31327 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPS1P31327 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPS1P31327 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC20.76■□□□□ 0.91
CPS1P31327 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPS1P31327 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CPS1P31327 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPS1P31327 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.76■□□□□ 0.91
CPS1P31327 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPS1P31327 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CPS1P31327 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC20.76■□□□□ 0.91
CPS1P31327 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CPS1P31327 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC20.76■□□□□ 0.91
CPS1P31327 AC093826.1-201ENST00000508655 993 ntBASIC20.76■□□□□ 0.91
CPS1P31327 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.76■□□□□ 0.91
CPS1P31327 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC20.76■□□□□ 0.91
CPS1P31327 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC20.76■□□□□ 0.91
CPS1P31327 CR392039.1-201ENST00000623217 204 ntBASIC20.76■□□□□ 0.91
CPS1P31327 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPS1P31327 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPS1P31327 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPS1P31327 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC20.76■□□□□ 0.91
CPS1P31327 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPS1P31327 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPS1P31327 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPS1P31327 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC20.75■□□□□ 0.91
CPS1P31327 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC20.75■□□□□ 0.91
CPS1P31327 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC20.75■□□□□ 0.91
CPS1P31327 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CPS1P31327 NHP2P1-201ENST00000335274 462 ntBASIC20.75■□□□□ 0.91
CPS1P31327 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPS1P31327 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.75■□□□□ 0.91
CPS1P31327 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC20.75■□□□□ 0.91
CPS1P31327 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC20.75■□□□□ 0.91
CPS1P31327 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.75■□□□□ 0.91
CPS1P31327 MBP-238ENST00000580402 915 ntTSL 5 BASIC20.75■□□□□ 0.91
CPS1P31327 NAV1-210ENST00000593583 726 ntBASIC20.75■□□□□ 0.91
CPS1P31327 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CPS1P31327 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPS1P31327 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CPS1P31327 AC025183.3-201ENST00000623526 1482 ntBASIC20.75■□□□□ 0.91
CPS1P31327 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPS1P31327 STRN-202ENST00000379213 2254 ntTSL 5 BASIC20.75■□□□□ 0.91
CPS1P31327 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPS1P31327 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPS1P31327 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPS1P31327 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC20.74■□□□□ 0.91
CPS1P31327 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.74■□□□□ 0.91
CPS1P31327 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CPS1P31327 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 GNG10P1-201ENST00000452289 199 ntBASIC20.74■□□□□ 0.91
CPS1P31327 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC20.74■□□□□ 0.91
CPS1P31327 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 HERC2P11-201ENST00000562845 725 ntBASIC20.74■□□□□ 0.91
CPS1P31327 AC100756.2-201ENST00000569537 736 ntBASIC20.74■□□□□ 0.91
CPS1P31327 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC20.74■□□□□ 0.91
CPS1P31327 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CPS1P31327 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPS1P31327 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms