Protein–RNA interactions for Protein: P28290

SSFA2, Sperm-specific antigen 2, humanhuman

Predictions only

Length 1,259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2P28290 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.42■□□□□ 0.7
SSFA2P28290 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC19.42■□□□□ 0.7
SSFA2P28290 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.42■□□□□ 0.7
SSFA2P28290 MARK2P5-201ENST00000507649 634 ntBASIC19.42■□□□□ 0.7
SSFA2P28290 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC19.42■□□□□ 0.7
SSFA2P28290 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.42■□□□□ 0.7
SSFA2P28290 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSFA2P28290 AL353770.1-201ENST00000614915 403 ntBASIC19.42■□□□□ 0.7
SSFA2P28290 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSFA2P28290 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SSFA2P28290 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSFA2P28290 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSFA2P28290 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.42■□□□□ 0.7
SSFA2P28290 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSFA2P28290 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSFA2P28290 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSFA2P28290 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSFA2P28290 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSFA2P28290 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SSFA2P28290 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.42■□□□□ 0.7
SSFA2P28290 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSFA2P28290 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSFA2P28290 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSFA2P28290 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSFA2P28290 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSFA2P28290 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SSFA2P28290 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSFA2P28290 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSFA2P28290 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSFA2P28290 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSFA2P28290 AC006335.1-201ENST00000445200 547 ntBASIC19.41■□□□□ 0.7
SSFA2P28290 RNMTL1P1-201ENST00000454103 560 ntBASIC19.41■□□□□ 0.7
SSFA2P28290 AC022616.1-201ENST00000518688 554 ntBASIC19.41■□□□□ 0.7
SSFA2P28290 LY6E-208ENST00000520531 490 ntTSL 2 BASIC19.41■□□□□ 0.7
SSFA2P28290 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSFA2P28290 RN7SL163P-201ENST00000583100 276 ntBASIC19.41■□□□□ 0.7
SSFA2P28290 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSFA2P28290 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.41■□□□□ 0.7
SSFA2P28290 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.41■□□□□ 0.7
SSFA2P28290 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.41■□□□□ 0.7
SSFA2P28290 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.41■□□□□ 0.7
SSFA2P28290 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SSFA2P28290 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSFA2P28290 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSFA2P28290 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSFA2P28290 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SSFA2P28290 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.4■□□□□ 0.7
SSFA2P28290 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 AP003680.1-201ENST00000598970 3660 ntBASIC19.4■□□□□ 0.7
SSFA2P28290 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.4■□□□□ 0.7
SSFA2P28290 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.4■□□□□ 0.7
SSFA2P28290 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.4■□□□□ 0.7
SSFA2P28290 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.4■□□□□ 0.7
SSFA2P28290 TUBB8P8-201ENST00000458717 1058 ntBASIC19.4■□□□□ 0.7
SSFA2P28290 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.4■□□□□ 0.7
SSFA2P28290 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC19.4■□□□□ 0.7
SSFA2P28290 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.4■□□□□ 0.7
SSFA2P28290 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SSFA2P28290 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.4■□□□□ 0.7
SSFA2P28290 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.4■□□□□ 0.7
SSFA2P28290 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.4■□□□□ 0.7
SSFA2P28290 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSFA2P28290 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SSFA2P28290 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SSFA2P28290 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.4■□□□□ 0.7
SSFA2P28290 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.39■□□□□ 0.7
SSFA2P28290 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.39■□□□□ 0.7
SSFA2P28290 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSFA2P28290 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSFA2P28290 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SSFA2P28290 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SSFA2P28290 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SSFA2P28290 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSFA2P28290 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.39■□□□□ 0.69
SSFA2P28290 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSFA2P28290 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSFA2P28290 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSFA2P28290 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.39■□□□□ 0.69
SSFA2P28290 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSFA2P28290 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.39■□□□□ 0.69
SSFA2P28290 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.39■□□□□ 0.69
SSFA2P28290 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.39■□□□□ 0.69
SSFA2P28290 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.39■□□□□ 0.69
SSFA2P28290 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSFA2P28290 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.39■□□□□ 0.69
SSFA2P28290 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.39■□□□□ 0.69
SSFA2P28290 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.39■□□□□ 0.69
SSFA2P28290 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms