Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 AC015818.8-201ENST00000587907 1519 ntBASIC13.04□□□□□ -0.32
CD40P25942 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.04□□□□□ -0.32
CD40P25942 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 MROH4P-201ENST00000431302 1578 ntBASIC13.04□□□□□ -0.32
CD40P25942 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.04□□□□□ -0.32
CD40P25942 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.04□□□□□ -0.32
CD40P25942 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 MTX1P1-201ENST00000440904 838 ntBASIC13.04□□□□□ -0.32
CD40P25942 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.04□□□□□ -0.32
CD40P25942 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.04□□□□□ -0.32
CD40P25942 FAM8A2P-201ENST00000528813 1142 ntBASIC13.04□□□□□ -0.32
CD40P25942 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.04□□□□□ -0.32
CD40P25942 PPY2P-201ENST00000582808 702 ntBASIC13.04□□□□□ -0.32
CD40P25942 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.04□□□□□ -0.32
CD40P25942 ZACNP1-201ENST00000612259 710 ntBASIC13.04□□□□□ -0.32
CD40P25942 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.04□□□□□ -0.32
CD40P25942 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CD40P25942 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.04□□□□□ -0.32
CD40P25942 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CD40P25942 LILRP1-201ENST00000444199 1370 ntBASIC13.04□□□□□ -0.32
CD40P25942 WASH3P-207ENST00000560956 1394 ntBASIC13.04□□□□□ -0.32
CD40P25942 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CD40P25942 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
CD40P25942 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CD40P25942 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CD40P25942 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.03□□□□□ -0.32
CD40P25942 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.03□□□□□ -0.32
CD40P25942 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
CD40P25942 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.03□□□□□ -0.32
CD40P25942 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 AC073413.1-201ENST00000603927 732 ntBASIC13.03□□□□□ -0.32
CD40P25942 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.03□□□□□ -0.32
CD40P25942 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.03□□□□□ -0.32
CD40P25942 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 FKBP4P6-201ENST00000457486 1332 ntBASIC13.03□□□□□ -0.32
CD40P25942 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CD40P25942 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.03□□□□□ -0.32
CD40P25942 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 AC132872.4-202ENST00000622924 2756 ntBASIC13.03□□□□□ -0.32
CD40P25942 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CD40P25942 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms