Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
RFX1P22670 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.53■□□□□ 0.24
RFX1P22670 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
RFX1P22670 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RFX1P22670 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
RFX1P22670 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.52■□□□□ 0.24
RFX1P22670 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.52■□□□□ 0.24
RFX1P22670 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.52■□□□□ 0.24
RFX1P22670 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.52■□□□□ 0.24
RFX1P22670 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
RFX1P22670 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFX1P22670 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.52■□□□□ 0.24
RFX1P22670 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFX1P22670 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFX1P22670 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFX1P22670 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFX1P22670 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
RFX1P22670 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.52■□□□□ 0.24
RFX1P22670 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFX1P22670 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFX1P22670 AL645937.2-201ENST00000396808 931 ntBASIC16.52■□□□□ 0.24
RFX1P22670 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFX1P22670 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RFX1P22670 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.52■□□□□ 0.24
RFX1P22670 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.52■□□□□ 0.24
RFX1P22670 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.52■□□□□ 0.24
RFX1P22670 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.52■□□□□ 0.24
RFX1P22670 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RFX1P22670 RPL13AP25-201ENST00000484130 612 ntBASIC16.52■□□□□ 0.24
RFX1P22670 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.52■□□□□ 0.24
RFX1P22670 SLC25A47P1-201ENST00000531577 414 ntBASIC16.52■□□□□ 0.24
RFX1P22670 TDH-203ENST00000531764 1110 ntBASIC16.52■□□□□ 0.24
RFX1P22670 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.52■□□□□ 0.24
RFX1P22670 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.52■□□□□ 0.24
RFX1P22670 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.52■□□□□ 0.24
RFX1P22670 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.52■□□□□ 0.24
RFX1P22670 AC243960.2-201ENST00000600996 747 ntBASIC16.52■□□□□ 0.24
RFX1P22670 AC133539.2-201ENST00000604757 467 ntBASIC16.52■□□□□ 0.24
RFX1P22670 CU634019.7-201ENST00000624153 1185 ntBASIC16.52■□□□□ 0.24
RFX1P22670 FP236241.2-201ENST00000624906 1185 ntBASIC16.52■□□□□ 0.24
RFX1P22670 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RFX1P22670 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RFX1P22670 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RFX1P22670 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.52■□□□□ 0.23
RFX1P22670 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.52■□□□□ 0.23
RFX1P22670 KRT8P22-201ENST00000562317 1415 ntBASIC16.52■□□□□ 0.23
RFX1P22670 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RFX1P22670 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
RFX1P22670 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
RFX1P22670 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RFX1P22670 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.51■□□□□ 0.23
RFX1P22670 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RFX1P22670 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 AL360270.3-201ENST00000609118 1348 ntBASIC16.51■□□□□ 0.23
RFX1P22670 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RFX1P22670 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.51■□□□□ 0.23
RFX1P22670 MIR1908-201ENST00000410394 80 ntBASIC16.51■□□□□ 0.23
RFX1P22670 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.51■□□□□ 0.23
RFX1P22670 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.51■□□□□ 0.23
RFX1P22670 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.51■□□□□ 0.23
RFX1P22670 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.51■□□□□ 0.23
RFX1P22670 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.51■□□□□ 0.23
RFX1P22670 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.51■□□□□ 0.23
RFX1P22670 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
RFX1P22670 AL583810.1-201ENST00000553344 1045 ntBASIC16.51■□□□□ 0.23
RFX1P22670 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RFX1P22670 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.51■□□□□ 0.23
RFX1P22670 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
RFX1P22670 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.51■□□□□ 0.23
RFX1P22670 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RFX1P22670 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFX1P22670 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms