Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ERCC2P18074 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ERCC2P18074 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ERCC2P18074 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.59■□□□□ 0.09
ERCC2P18074 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ERCC2P18074 CU639417.3-201ENST00000624240 1404 ntBASIC15.59■□□□□ 0.09
ERCC2P18074 AC007686.3-201ENST00000619017 3487 ntBASIC15.59■□□□□ 0.09
ERCC2P18074 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ERCC2P18074 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
ERCC2P18074 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ERCC2P18074 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
ERCC2P18074 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ERCC2P18074 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ERCC2P18074 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ERCC2P18074 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
ERCC2P18074 AL365209.1-201ENST00000624418 6473 ntBASIC15.58■□□□□ 0.09
ERCC2P18074 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ERCC2P18074 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.58■□□□□ 0.09
ERCC2P18074 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.58■□□□□ 0.09
ERCC2P18074 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ERCC2P18074 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.58■□□□□ 0.09
ERCC2P18074 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.58■□□□□ 0.08
ERCC2P18074 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.58■□□□□ 0.08
ERCC2P18074 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ERCC2P18074 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
ERCC2P18074 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.58■□□□□ 0.08
ERCC2P18074 COX5BP8-201ENST00000416911 349 ntBASIC15.58■□□□□ 0.08
ERCC2P18074 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.58■□□□□ 0.08
ERCC2P18074 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.58■□□□□ 0.08
ERCC2P18074 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.58■□□□□ 0.08
ERCC2P18074 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.58■□□□□ 0.08
ERCC2P18074 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
ERCC2P18074 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ERCC2P18074 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.58■□□□□ 0.08
ERCC2P18074 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ERCC2P18074 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.58■□□□□ 0.08
ERCC2P18074 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.58■□□□□ 0.08
ERCC2P18074 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
ERCC2P18074 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
ERCC2P18074 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.58■□□□□ 0.08
ERCC2P18074 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
ERCC2P18074 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.58■□□□□ 0.08
ERCC2P18074 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
ERCC2P18074 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ERCC2P18074 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
ERCC2P18074 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
ERCC2P18074 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
ERCC2P18074 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
ERCC2P18074 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.57■□□□□ 0.08
ERCC2P18074 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC2P18074 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
ERCC2P18074 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ERCC2P18074 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.57■□□□□ 0.08
ERCC2P18074 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ERCC2P18074 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.57■□□□□ 0.08
ERCC2P18074 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC2P18074 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ERCC2P18074 AL512384.1-201ENST00000406683 331 ntBASIC15.57■□□□□ 0.08
ERCC2P18074 NME2P1-201ENST00000426182 414 ntBASIC15.57■□□□□ 0.08
ERCC2P18074 AP001889.1-201ENST00000525414 633 ntBASIC15.57■□□□□ 0.08
ERCC2P18074 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.57■□□□□ 0.08
ERCC2P18074 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.57■□□□□ 0.08
ERCC2P18074 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 LINC02084-201ENST00000606069 1096 ntBASIC15.57■□□□□ 0.08
ERCC2P18074 AC145423.3-201ENST00000615987 467 ntBASIC15.57■□□□□ 0.08
ERCC2P18074 IGHV3-72-202ENST00000621503 303 ntBASIC15.57■□□□□ 0.08
ERCC2P18074 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.57■□□□□ 0.08
ERCC2P18074 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ERCC2P18074 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms