Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMPD1P17405 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SMPD1P17405 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMPD1P17405 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMPD1P17405 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SMPD1P17405 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SMPD1P17405 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SMPD1P17405 AC136621.1-201ENST00000624017 2304 ntBASIC16.64■□□□□ 0.25
SMPD1P17405 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.64■□□□□ 0.25
SMPD1P17405 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SMPD1P17405 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 AC008894.3-201ENST00000624324 3103 ntBASIC16.64■□□□□ 0.25
SMPD1P17405 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SMPD1P17405 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.64■□□□□ 0.25
SMPD1P17405 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 AC239868.1-201ENST00000369385 493 ntBASIC16.64■□□□□ 0.25
SMPD1P17405 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.64■□□□□ 0.25
SMPD1P17405 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 AL645933.1-201ENST00000440087 609 ntBASIC16.64■□□□□ 0.25
SMPD1P17405 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.64■□□□□ 0.25
SMPD1P17405 AC019193.1-201ENST00000506678 823 ntBASIC16.64■□□□□ 0.25
SMPD1P17405 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.64■□□□□ 0.25
SMPD1P17405 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SMPD1P17405 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.64■□□□□ 0.25
SMPD1P17405 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.64■□□□□ 0.25
SMPD1P17405 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.64■□□□□ 0.25
SMPD1P17405 AC131206.1-201ENST00000538078 1211 ntBASIC16.64■□□□□ 0.25
SMPD1P17405 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
SMPD1P17405 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.64■□□□□ 0.25
SMPD1P17405 MIR7845-201ENST00000618396 99 ntBASIC16.64■□□□□ 0.25
SMPD1P17405 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SMPD1P17405 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.64■□□□□ 0.25
SMPD1P17405 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.64■□□□□ 0.25
SMPD1P17405 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 MROH4P-201ENST00000431302 1578 ntBASIC16.64■□□□□ 0.25
SMPD1P17405 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.64■□□□□ 0.25
SMPD1P17405 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMPD1P17405 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.63■□□□□ 0.25
SMPD1P17405 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.63■□□□□ 0.25
SMPD1P17405 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.63■□□□□ 0.25
SMPD1P17405 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.63■□□□□ 0.25
SMPD1P17405 AC013726.1-201ENST00000563747 2285 ntBASIC16.63■□□□□ 0.25
SMPD1P17405 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.63■□□□□ 0.25
SMPD1P17405 KRT8P21-201ENST00000430398 1491 ntBASIC16.63■□□□□ 0.25
SMPD1P17405 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.63■□□□□ 0.25
SMPD1P17405 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.63■□□□□ 0.25
SMPD1P17405 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SMPD1P17405 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.63■□□□□ 0.25
SMPD1P17405 FGFR3P1-201ENST00000449999 601 ntBASIC16.63■□□□□ 0.25
SMPD1P17405 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.63■□□□□ 0.25
SMPD1P17405 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.63■□□□□ 0.25
SMPD1P17405 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SMPD1P17405 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
SMPD1P17405 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.63■□□□□ 0.25
SMPD1P17405 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMPD1P17405 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.63■□□□□ 0.25
SMPD1P17405 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SMPD1P17405 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 AC007292.2-201ENST00000593524 1812 ntBASIC16.63■□□□□ 0.25
SMPD1P17405 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.63■□□□□ 0.25
SMPD1P17405 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMPD1P17405 HYMAI-201ENST00000635591 3347 ntBASIC16.63■□□□□ 0.25
SMPD1P17405 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms