Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BMP4P12644 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
BMP4P12644 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BMP4P12644 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BMP4P12644 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.02□□□□□ -0.16
BMP4P12644 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BMP4P12644 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BMP4P12644 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BMP4P12644 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.02□□□□□ -0.16
BMP4P12644 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
BMP4P12644 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BMP4P12644 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BMP4P12644 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
BMP4P12644 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BMP4P12644 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
BMP4P12644 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 TSPY16P-201ENST00000449843 468 ntBASIC14.02□□□□□ -0.17
BMP4P12644 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.02□□□□□ -0.17
BMP4P12644 COX20P2-201ENST00000452636 358 ntBASIC14.02□□□□□ -0.17
BMP4P12644 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.02□□□□□ -0.17
BMP4P12644 RNA5SP410-201ENST00000516285 106 ntBASIC14.02□□□□□ -0.17
BMP4P12644 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.02□□□□□ -0.17
BMP4P12644 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.02□□□□□ -0.17
BMP4P12644 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.02□□□□□ -0.17
BMP4P12644 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.02□□□□□ -0.17
BMP4P12644 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
BMP4P12644 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.02□□□□□ -0.17
BMP4P12644 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.02□□□□□ -0.17
BMP4P12644 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
BMP4P12644 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
BMP4P12644 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.02□□□□□ -0.17
BMP4P12644 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
BMP4P12644 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 AC127383.1-201ENST00000444697 1800 ntBASIC14.01□□□□□ -0.17
BMP4P12644 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.01□□□□□ -0.17
BMP4P12644 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
BMP4P12644 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.01□□□□□ -0.17
BMP4P12644 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
BMP4P12644 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.01□□□□□ -0.17
BMP4P12644 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 AC097493.3-201ENST00000509725 367 ntBASIC14.01□□□□□ -0.17
BMP4P12644 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.01□□□□□ -0.17
BMP4P12644 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 AC138761.1-201ENST00000584393 385 ntBASIC14.01□□□□□ -0.17
BMP4P12644 AC026979.3-201ENST00000607315 403 ntBASIC14.01□□□□□ -0.17
BMP4P12644 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.01□□□□□ -0.17
BMP4P12644 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 AC113367.3-201ENST00000508316 1912 ntBASIC14.01□□□□□ -0.17
BMP4P12644 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.01□□□□□ -0.17
BMP4P12644 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.01□□□□□ -0.17
BMP4P12644 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
BMP4P12644 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BMP4P12644 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
BMP4P12644 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.01□□□□□ -0.17
BMP4P12644 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BMP4P12644 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BMP4P12644 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
BMP4P12644 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
BMP4P12644 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms