Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.8■□□□□ 0.28
COL11A1P12107 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 AL136172.1-201ENST00000598590 1394 ntBASIC16.8■□□□□ 0.28
COL11A1P12107 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
COL11A1P12107 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 AC092580.1-201ENST00000433998 658 ntBASIC16.8■□□□□ 0.28
COL11A1P12107 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.8■□□□□ 0.28
COL11A1P12107 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC16.8■□□□□ 0.28
COL11A1P12107 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.8■□□□□ 0.28
COL11A1P12107 AC008723.1-201ENST00000506922 207 ntBASIC16.8■□□□□ 0.28
COL11A1P12107 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC16.8■□□□□ 0.28
COL11A1P12107 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.8■□□□□ 0.28
COL11A1P12107 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL11A1P12107 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.8■□□□□ 0.28
COL11A1P12107 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.8■□□□□ 0.28
COL11A1P12107 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.79■□□□□ 0.28
COL11A1P12107 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
COL11A1P12107 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 AC139712.1-201ENST00000378256 1875 ntBASIC16.79■□□□□ 0.28
COL11A1P12107 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
COL11A1P12107 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.79■□□□□ 0.28
COL11A1P12107 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.79■□□□□ 0.28
COL11A1P12107 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.79■□□□□ 0.28
COL11A1P12107 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
COL11A1P12107 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
COL11A1P12107 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.79■□□□□ 0.28
COL11A1P12107 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.79■□□□□ 0.28
COL11A1P12107 AP000356.3-201ENST00000382243 753 ntBASIC16.79■□□□□ 0.28
COL11A1P12107 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 TSPY25P-201ENST00000429463 745 ntBASIC16.79■□□□□ 0.28
COL11A1P12107 AC078991.1-201ENST00000437297 610 ntBASIC16.79■□□□□ 0.28
COL11A1P12107 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 RN7SL258P-201ENST00000478664 300 ntBASIC16.79■□□□□ 0.28
COL11A1P12107 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.79■□□□□ 0.28
COL11A1P12107 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.79■□□□□ 0.28
COL11A1P12107 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.79■□□□□ 0.28
COL11A1P12107 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
COL11A1P12107 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
COL11A1P12107 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL11A1P12107 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
COL11A1P12107 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
COL11A1P12107 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.78■□□□□ 0.28
COL11A1P12107 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.78■□□□□ 0.28
COL11A1P12107 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
COL11A1P12107 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
COL11A1P12107 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.78■□□□□ 0.28
COL11A1P12107 RPSAP31-201ENST00000416648 895 ntBASIC16.78■□□□□ 0.28
COL11A1P12107 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.78■□□□□ 0.28
COL11A1P12107 AC104784.1-201ENST00000473096 294 ntBASIC16.78■□□□□ 0.28
COL11A1P12107 PGAM1P5-201ENST00000548011 764 ntBASIC16.78■□□□□ 0.28
COL11A1P12107 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.78■□□□□ 0.28
COL11A1P12107 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.78■□□□□ 0.28
COL11A1P12107 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.78■□□□□ 0.28
COL11A1P12107 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.78■□□□□ 0.28
COL11A1P12107 AC242376.2-201ENST00000619355 883 ntBASIC16.78■□□□□ 0.28
COL11A1P12107 AC009145.4-201ENST00000625119 1294 ntBASIC16.78■□□□□ 0.28
COL11A1P12107 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.78■□□□□ 0.28
COL11A1P12107 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.78■□□□□ 0.28
COL11A1P12107 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
COL11A1P12107 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.78■□□□□ 0.28
COL11A1P12107 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
COL11A1P12107 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms