Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.38□□□□□ -0.11
LAMP1P11279 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LAMP1P11279 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
LAMP1P11279 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LAMP1P11279 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
LAMP1P11279 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 GNAQP1-201ENST00000444815 1067 ntBASIC14.37□□□□□ -0.11
LAMP1P11279 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.37□□□□□ -0.11
LAMP1P11279 AC093214.1-201ENST00000511688 1107 ntBASIC14.37□□□□□ -0.11
LAMP1P11279 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.37□□□□□ -0.11
LAMP1P11279 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.37□□□□□ -0.11
LAMP1P11279 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.37□□□□□ -0.11
LAMP1P11279 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LAMP1P11279 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.37□□□□□ -0.11
LAMP1P11279 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.37□□□□□ -0.11
LAMP1P11279 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
LAMP1P11279 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.37□□□□□ -0.11
LAMP1P11279 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LAMP1P11279 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.37□□□□□ -0.11
LAMP1P11279 AC097376.2-205ENST00000610159 5334 ntBASIC14.37□□□□□ -0.11
LAMP1P11279 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LAMP1P11279 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LAMP1P11279 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LAMP1P11279 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LAMP1P11279 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LAMP1P11279 AC018665.1-201ENST00000622927 1362 ntBASIC14.36□□□□□ -0.11
LAMP1P11279 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
LAMP1P11279 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LAMP1P11279 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.36□□□□□ -0.11
LAMP1P11279 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.36□□□□□ -0.11
LAMP1P11279 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LAMP1P11279 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LAMP1P11279 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LAMP1P11279 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.36□□□□□ -0.11
LAMP1P11279 AL645937.2-201ENST00000396808 931 ntBASIC14.36□□□□□ -0.11
LAMP1P11279 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.36□□□□□ -0.11
LAMP1P11279 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.36□□□□□ -0.11
LAMP1P11279 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LAMP1P11279 BASP1P1-201ENST00000430708 665 ntBASIC14.36□□□□□ -0.11
LAMP1P11279 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
LAMP1P11279 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.36□□□□□ -0.11
LAMP1P11279 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.36□□□□□ -0.11
LAMP1P11279 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.36□□□□□ -0.11
LAMP1P11279 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.36□□□□□ -0.11
LAMP1P11279 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LAMP1P11279 AC005498.2-205ENST00000593218 784 ntBASIC14.36□□□□□ -0.11
LAMP1P11279 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.36□□□□□ -0.11
LAMP1P11279 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.36□□□□□ -0.11
LAMP1P11279 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LAMP1P11279 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LAMP1P11279 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms