Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGAP10645 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC21.62■■□□□ 1.05
CHGAP10645 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGAP10645 STK33-217ENST00000534493 1895 ntTSL 2 BASIC21.62■■□□□ 1.05
CHGAP10645 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHGAP10645 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHGAP10645 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CHGAP10645 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC21.61■■□□□ 1.05
CHGAP10645 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CHGAP10645 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CHGAP10645 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC21.61■■□□□ 1.05
CHGAP10645 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CHGAP10645 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC21.61■■□□□ 1.05
CHGAP10645 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CHGAP10645 SCARNA21-201ENST00000517026 139 ntBASIC21.61■■□□□ 1.05
CHGAP10645 AC009779.1-201ENST00000551138 283 ntBASIC21.61■■□□□ 1.05
CHGAP10645 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CHGAP10645 AC132192.2-201ENST00000596206 1147 ntBASIC21.61■■□□□ 1.05
CHGAP10645 IRF3-215ENST00000596822 823 ntTSL 3 BASIC21.61■■□□□ 1.05
CHGAP10645 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC21.61■■□□□ 1.05
CHGAP10645 AL132994.2-201ENST00000603120 687 ntBASIC21.61■■□□□ 1.05
CHGAP10645 AC084018.2-201ENST00000613093 2607 ntBASIC21.61■■□□□ 1.05
CHGAP10645 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC21.61■■□□□ 1.05
CHGAP10645 PCDHB19P-201ENST00000570871 2371 ntBASIC21.61■■□□□ 1.05
CHGAP10645 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHGAP10645 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC21.6■■□□□ 1.05
CHGAP10645 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC21.6■■□□□ 1.05
CHGAP10645 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CHGAP10645 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC21.6■■□□□ 1.05
CHGAP10645 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
CHGAP10645 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 AC136759.1-202ENST00000530858 2194 ntBASIC21.6■■□□□ 1.05
CHGAP10645 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC21.6■■□□□ 1.05
CHGAP10645 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC21.6■■□□□ 1.05
CHGAP10645 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC21.6■■□□□ 1.05
CHGAP10645 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CHGAP10645 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CHGAP10645 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CHGAP10645 AC073352.2-201ENST00000609385 439 ntBASIC21.6■■□□□ 1.05
CHGAP10645 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 AC006453.1-201ENST00000636037 1257 ntBASIC21.6■■□□□ 1.05
CHGAP10645 FER1L4-210ENST00000615531 5998 ntBASIC21.6■■□□□ 1.05
CHGAP10645 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC21.6■■□□□ 1.05
CHGAP10645 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC21.6■■□□□ 1.05
CHGAP10645 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHGAP10645 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CHGAP10645 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC21.6■■□□□ 1.05
CHGAP10645 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC21.6■■□□□ 1.05
CHGAP10645 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGAP10645 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CHGAP10645 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHGAP10645 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGAP10645 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGAP10645 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGAP10645 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGAP10645 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC21.59■■□□□ 1.05
CHGAP10645 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGAP10645 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC21.59■■□□□ 1.05
CHGAP10645 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGAP10645 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
CHGAP10645 AC242376.1-201ENST00000559033 726 ntBASIC21.59■■□□□ 1.05
CHGAP10645 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGAP10645 NAT9-211ENST00000580632 799 ntTSL 3 BASIC21.59■■□□□ 1.05
CHGAP10645 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC21.59■■□□□ 1.05
CHGAP10645 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGAP10645 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGAP10645 AC007718.1-201ENST00000621078 280 ntBASIC21.59■■□□□ 1.05
CHGAP10645 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGAP10645 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHGAP10645 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHGAP10645 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.59■■□□□ 1.05
CHGAP10645 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHGAP10645 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHGAP10645 AC006058.4-201ENST00000624016 1670 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms