Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 AC078991.1-201ENST00000437297 610 ntBASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 AC092171.5-201ENST00000608012 942 ntBASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 HLA-C-210ENST00000640219 976 ntBASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CSB-PGBD3P0DP91 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 OR2K2-202ENST00000374428 1038 ntBASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 RPL8P2-201ENST00000430538 502 ntBASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 AC114501.1-201ENST00000445949 172 ntBASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 AC008825.2-201ENST00000603374 718 ntBASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 AC087045.2-201ENST00000606279 1003 ntBASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CSB-PGBD3P0DP91 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 KRT8P21-201ENST00000430398 1491 ntBASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 AL138725.1-201ENST00000407347 1314 ntBASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 RPSAP31-201ENST00000416648 895 ntBASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 DNAJB1P1-201ENST00000429417 1024 ntBASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 PGAM1P5-201ENST00000548011 764 ntBASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 AC103810.10-201ENST00000606504 343 ntBASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 MIR6720-201ENST00000611664 98 ntBASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 Z98259.2-201ENST00000641583 609 ntBASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CSB-PGBD3P0DP91 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.86■□□□□ 0.77
CSB-PGBD3P0DP91 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSB-PGBD3P0DP91 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CSB-PGBD3P0DP91 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSB-PGBD3P0DP91 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CSB-PGBD3P0DP91 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CSB-PGBD3P0DP91 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CSB-PGBD3P0DP91 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CSB-PGBD3P0DP91 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms