Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CYP3A4P08684 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CYP3A4P08684 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 BTBD6P1-201ENST00000412176 1267 ntBASIC16.9■□□□□ 0.3
CYP3A4P08684 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.9■□□□□ 0.3
CYP3A4P08684 MTX1P1-201ENST00000440904 838 ntBASIC16.9■□□□□ 0.3
CYP3A4P08684 HSPB1P2-201ENST00000448722 546 ntBASIC16.9■□□□□ 0.3
CYP3A4P08684 AL591846.1-201ENST00000451736 433 ntBASIC16.9■□□□□ 0.3
CYP3A4P08684 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.9■□□□□ 0.3
CYP3A4P08684 AC092658.1-201ENST00000505836 891 ntBASIC16.9■□□□□ 0.3
CYP3A4P08684 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.9■□□□□ 0.3
CYP3A4P08684 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.9■□□□□ 0.3
CYP3A4P08684 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.9■□□□□ 0.3
CYP3A4P08684 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.9■□□□□ 0.3
CYP3A4P08684 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CYP3A4P08684 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.9■□□□□ 0.3
CYP3A4P08684 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.9■□□□□ 0.3
CYP3A4P08684 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.9■□□□□ 0.3
CYP3A4P08684 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CYP3A4P08684 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CYP3A4P08684 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CYP3A4P08684 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CYP3A4P08684 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
CYP3A4P08684 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CYP3A4P08684 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CYP3A4P08684 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CYP3A4P08684 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.89■□□□□ 0.29
CYP3A4P08684 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.89■□□□□ 0.29
CYP3A4P08684 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.89■□□□□ 0.29
CYP3A4P08684 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.89■□□□□ 0.29
CYP3A4P08684 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CYP3A4P08684 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.89■□□□□ 0.29
CYP3A4P08684 MIR663B-201ENST00000408361 115 ntBASIC16.89■□□□□ 0.29
CYP3A4P08684 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.89■□□□□ 0.29
CYP3A4P08684 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.89■□□□□ 0.29
CYP3A4P08684 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.89■□□□□ 0.29
CYP3A4P08684 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.89■□□□□ 0.29
CYP3A4P08684 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.89■□□□□ 0.29
CYP3A4P08684 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.89■□□□□ 0.29
CYP3A4P08684 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CYP3A4P08684 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CYP3A4P08684 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.89■□□□□ 0.29
CYP3A4P08684 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CYP3A4P08684 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CYP3A4P08684 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.89■□□□□ 0.29
CYP3A4P08684 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CYP3A4P08684 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.88■□□□□ 0.29
CYP3A4P08684 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 FAM86MP-201ENST00000340703 885 ntBASIC16.88■□□□□ 0.29
CYP3A4P08684 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.88■□□□□ 0.29
CYP3A4P08684 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.88■□□□□ 0.29
CYP3A4P08684 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
CYP3A4P08684 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CYP3A4P08684 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.88■□□□□ 0.29
CYP3A4P08684 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.88■□□□□ 0.29
CYP3A4P08684 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms