Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SFTPBP07988 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 AL031595.1-201ENST00000623969 4709 ntBASIC13.28□□□□□ -0.28
SFTPBP07988 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SFTPBP07988 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SFTPBP07988 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SFTPBP07988 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.27□□□□□ -0.28
SFTPBP07988 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SFTPBP07988 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
SFTPBP07988 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SFTPBP07988 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
SFTPBP07988 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SFTPBP07988 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.27□□□□□ -0.28
SFTPBP07988 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SFTPBP07988 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SFTPBP07988 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.27□□□□□ -0.29
SFTPBP07988 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SFTPBP07988 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 MIR661-201ENST00000384842 89 ntBASIC13.27□□□□□ -0.29
SFTPBP07988 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.27□□□□□ -0.29
SFTPBP07988 AC074338.1-201ENST00000416825 156 ntBASIC13.27□□□□□ -0.29
SFTPBP07988 TSSK5P-201ENST00000423978 907 ntBASIC13.27□□□□□ -0.29
SFTPBP07988 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.27□□□□□ -0.29
SFTPBP07988 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.27□□□□□ -0.29
SFTPBP07988 AC004890.2-204ENST00000481968 304 ntBASIC13.27□□□□□ -0.29
SFTPBP07988 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.27□□□□□ -0.29
SFTPBP07988 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.27□□□□□ -0.29
SFTPBP07988 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.27□□□□□ -0.29
SFTPBP07988 TEX28P1-201ENST00000613479 1221 ntBASIC13.27□□□□□ -0.29
SFTPBP07988 TEX28P2-201ENST00000617764 1221 ntBASIC13.27□□□□□ -0.29
SFTPBP07988 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
SFTPBP07988 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SFTPBP07988 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SFTPBP07988 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.27□□□□□ -0.29
SFTPBP07988 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.27□□□□□ -0.29
SFTPBP07988 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.27□□□□□ -0.29
SFTPBP07988 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.27□□□□□ -0.29
SFTPBP07988 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SFTPBP07988 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.27□□□□□ -0.29
SFTPBP07988 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SFTPBP07988 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SFTPBP07988 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
SFTPBP07988 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.26□□□□□ -0.29
SFTPBP07988 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
SFTPBP07988 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 RPL5P21-201ENST00000404620 815 ntBASIC13.26□□□□□ -0.29
SFTPBP07988 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 AL080243.2-201ENST00000418783 582 ntBASIC13.26□□□□□ -0.29
SFTPBP07988 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SFTPBP07988 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.26□□□□□ -0.29
SFTPBP07988 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.26□□□□□ -0.29
SFTPBP07988 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.26□□□□□ -0.29
SFTPBP07988 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.26□□□□□ -0.29
SFTPBP07988 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SFTPBP07988 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.26□□□□□ -0.29
SFTPBP07988 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms