Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.37■□□□□ 0.69
COL5A2P05997 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL5A2P05997 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 AC073869.2-201ENST00000417338 1026 ntBASIC19.37■□□□□ 0.69
COL5A2P05997 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC19.37■□□□□ 0.69
COL5A2P05997 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC19.37■□□□□ 0.69
COL5A2P05997 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.37■□□□□ 0.69
COL5A2P05997 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.37■□□□□ 0.69
COL5A2P05997 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.37■□□□□ 0.69
COL5A2P05997 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC19.37■□□□□ 0.69
COL5A2P05997 AC124068.2-201ENST00000569473 1109 ntBASIC19.37■□□□□ 0.69
COL5A2P05997 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC19.37■□□□□ 0.69
COL5A2P05997 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COL5A2P05997 AP002353.1-201ENST00000528257 1599 ntBASIC19.37■□□□□ 0.69
COL5A2P05997 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.37■□□□□ 0.69
COL5A2P05997 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COL5A2P05997 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COL5A2P05997 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL5A2P05997 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL5A2P05997 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.36■□□□□ 0.69
COL5A2P05997 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC19.36■□□□□ 0.69
COL5A2P05997 PGAM1P12-201ENST00000505622 748 ntBASIC19.36■□□□□ 0.69
COL5A2P05997 AC068867.1-201ENST00000559855 150 ntBASIC19.36■□□□□ 0.69
COL5A2P05997 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC19.36■□□□□ 0.69
COL5A2P05997 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC19.36■□□□□ 0.69
COL5A2P05997 AC140113.1-201ENST00000603467 169 ntBASIC19.36■□□□□ 0.69
COL5A2P05997 ETV2-207ENST00000619399 994 ntTSL 5 BASIC19.36■□□□□ 0.69
COL5A2P05997 AL451007.2-201ENST00000632004 563 ntBASIC19.36■□□□□ 0.69
COL5A2P05997 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COL5A2P05997 API5-208ENST00000531273 1868 ntTSL 2 BASIC19.36■□□□□ 0.69
COL5A2P05997 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.36■□□□□ 0.69
COL5A2P05997 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.36■□□□□ 0.69
COL5A2P05997 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL5A2P05997 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL5A2P05997 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL5A2P05997 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL5A2P05997 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL5A2P05997 MRPL37P1-201ENST00000592451 1337 ntBASIC19.36■□□□□ 0.69
COL5A2P05997 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL5A2P05997 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL5A2P05997 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC19.35■□□□□ 0.69
COL5A2P05997 AC092580.1-201ENST00000433998 658 ntBASIC19.35■□□□□ 0.69
COL5A2P05997 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC19.35■□□□□ 0.69
COL5A2P05997 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC19.35■□□□□ 0.69
COL5A2P05997 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC19.35■□□□□ 0.69
COL5A2P05997 EIF5AP2-201ENST00000585668 1047 ntBASIC19.35■□□□□ 0.69
COL5A2P05997 AC002472.4-201ENST00000641915 272 ntBASIC19.35■□□□□ 0.69
COL5A2P05997 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC19.35■□□□□ 0.69
COL5A2P05997 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.35■□□□□ 0.69
COL5A2P05997 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 SSR4P1-203ENST00000599569 2260 ntBASIC19.35■□□□□ 0.69
COL5A2P05997 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.35■□□□□ 0.69
COL5A2P05997 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC19.35■□□□□ 0.69
COL5A2P05997 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.35■□□□□ 0.69
COL5A2P05997 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC19.35■□□□□ 0.69
COL5A2P05997 RPL18AP8-201ENST00000486071 528 ntBASIC19.35■□□□□ 0.69
COL5A2P05997 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
COL5A2P05997 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC19.35■□□□□ 0.69
COL5A2P05997 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC19.35■□□□□ 0.69
COL5A2P05997 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.35■□□□□ 0.69
COL5A2P05997 RNF146-211ENST00000609447 607 ntTSL 4 BASIC19.35■□□□□ 0.69
COL5A2P05997 AC011471.3-201ENST00000623576 402 ntBASIC19.35■□□□□ 0.69
COL5A2P05997 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
COL5A2P05997 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL5A2P05997 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.34■□□□□ 0.69
COL5A2P05997 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.34■□□□□ 0.69
COL5A2P05997 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COL5A2P05997 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC19.34■□□□□ 0.69
COL5A2P05997 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL5A2P05997 C18orf15-201ENST00000623680 2534 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms