Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG5O95196 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG5O95196 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG5O95196 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 RNMTL1P1-201ENST00000454103 560 ntBASIC16.29■□□□□ 0.2
CSPG5O95196 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG5O95196 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.29■□□□□ 0.2
CSPG5O95196 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG5O95196 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CSPG5O95196 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.29■□□□□ 0.2
CSPG5O95196 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG5O95196 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.29■□□□□ 0.2
CSPG5O95196 AL133499.1-201ENST00000596207 608 ntBASIC16.29■□□□□ 0.2
CSPG5O95196 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.29■□□□□ 0.2
CSPG5O95196 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.29■□□□□ 0.2
CSPG5O95196 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.29■□□□□ 0.2
CSPG5O95196 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG5O95196 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.29■□□□□ 0.2
CSPG5O95196 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.29■□□□□ 0.2
CSPG5O95196 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSPG5O95196 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.28■□□□□ 0.2
CSPG5O95196 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CSPG5O95196 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.28■□□□□ 0.2
CSPG5O95196 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CSPG5O95196 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CSPG5O95196 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.28■□□□□ 0.2
CSPG5O95196 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CSPG5O95196 AC011477.6-201ENST00000604980 1927 ntBASIC16.28■□□□□ 0.2
CSPG5O95196 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.28■□□□□ 0.2
CSPG5O95196 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 AC104457.1-201ENST00000401024 814 ntBASIC16.28■□□□□ 0.2
CSPG5O95196 GHSR-202ENST00000427970 912 ntBASIC16.28■□□□□ 0.2
CSPG5O95196 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.28■□□□□ 0.2
CSPG5O95196 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.28■□□□□ 0.2
CSPG5O95196 NUP210P1-202ENST00000504322 710 ntBASIC16.28■□□□□ 0.2
CSPG5O95196 AC005740.2-201ENST00000511085 419 ntBASIC16.28■□□□□ 0.2
CSPG5O95196 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.28■□□□□ 0.2
CSPG5O95196 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.28■□□□□ 0.2
CSPG5O95196 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CSPG5O95196 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.28■□□□□ 0.2
CSPG5O95196 MIR3619-201ENST00000579667 83 ntBASIC16.28■□□□□ 0.2
CSPG5O95196 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.28■□□□□ 0.2
CSPG5O95196 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.28■□□□□ 0.2
CSPG5O95196 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.28■□□□□ 0.2
CSPG5O95196 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CSPG5O95196 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.28■□□□□ 0.2
CSPG5O95196 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CSPG5O95196 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.28■□□□□ 0.2
CSPG5O95196 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.28■□□□□ 0.2
CSPG5O95196 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.28■□□□□ 0.2
CSPG5O95196 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CSPG5O95196 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CSPG5O95196 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CSPG5O95196 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSPG5O95196 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSPG5O95196 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CSPG5O95196 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CSPG5O95196 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSPG5O95196 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CSPG5O95196 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CSPG5O95196 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CSPG5O95196 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CSPG5O95196 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CSPG5O95196 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.27■□□□□ 0.2
CSPG5O95196 TMEM198B-204ENST00000484016 896 ntBASIC16.27■□□□□ 0.2
CSPG5O95196 AP003171.2-201ENST00000528208 925 ntBASIC16.27■□□□□ 0.2
CSPG5O95196 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms