Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.95□□□□□ -0.18
NKX2-2O95096 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
NKX2-2O95096 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.95□□□□□ -0.18
NKX2-2O95096 AC007389.4-201ENST00000454674 793 ntBASIC13.95□□□□□ -0.18
NKX2-2O95096 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NKX2-2O95096 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.95□□□□□ -0.18
NKX2-2O95096 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
NKX2-2O95096 AL596325.1-201ENST00000563991 1082 ntBASIC13.95□□□□□ -0.18
NKX2-2O95096 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NKX2-2O95096 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NKX2-2O95096 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NKX2-2O95096 AC145423.3-201ENST00000615987 467 ntBASIC13.95□□□□□ -0.18
NKX2-2O95096 AL358472.5-202ENST00000641448 1267 ntBASIC13.95□□□□□ -0.18
NKX2-2O95096 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
NKX2-2O95096 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NKX2-2O95096 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NKX2-2O95096 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX2-2O95096 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NKX2-2O95096 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
NKX2-2O95096 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.95□□□□□ -0.18
NKX2-2O95096 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.94□□□□□ -0.18
NKX2-2O95096 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.94□□□□□ -0.18
NKX2-2O95096 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NKX2-2O95096 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
NKX2-2O95096 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NKX2-2O95096 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX2-2O95096 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX2-2O95096 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
NKX2-2O95096 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX2-2O95096 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.94□□□□□ -0.18
NKX2-2O95096 TLE1P1-201ENST00000422965 589 ntBASIC13.94□□□□□ -0.18
NKX2-2O95096 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
NKX2-2O95096 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.94□□□□□ -0.18
NKX2-2O95096 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX2-2O95096 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.94□□□□□ -0.18
NKX2-2O95096 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.94□□□□□ -0.18
NKX2-2O95096 AP005018.1-201ENST00000525475 301 ntBASIC13.94□□□□□ -0.18
NKX2-2O95096 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
NKX2-2O95096 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.94□□□□□ -0.18
NKX2-2O95096 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.94□□□□□ -0.18
NKX2-2O95096 AC015936.2-201ENST00000593177 259 ntBASIC13.94□□□□□ -0.18
NKX2-2O95096 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.94□□□□□ -0.18
NKX2-2O95096 AC004466.1-201ENST00000599515 1080 ntBASIC13.94□□□□□ -0.18
NKX2-2O95096 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NKX2-2O95096 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NKX2-2O95096 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
NKX2-2O95096 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 AL138709.1-201ENST00000614840 1693 ntBASIC13.94□□□□□ -0.18
NKX2-2O95096 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX2-2O95096 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NKX2-2O95096 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NKX2-2O95096 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.94□□□□□ -0.18
NKX2-2O95096 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NKX2-2O95096 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-2O95096 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-2O95096 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-2O95096 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NKX2-2O95096 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-2O95096 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-2O95096 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NKX2-2O95096 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
NKX2-2O95096 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-2O95096 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.93□□□□□ -0.18
NKX2-2O95096 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-2O95096 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NKX2-2O95096 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
NKX2-2O95096 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms