Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.24■□□□□ 0.03
SMAD6O43541 AL023775.1-201ENST00000454907 1746 ntBASIC15.24■□□□□ 0.03
SMAD6O43541 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.24■□□□□ 0.03
SMAD6O43541 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 BRWD1P1-201ENST00000401091 371 ntBASIC15.24■□□□□ 0.03
SMAD6O43541 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.24■□□□□ 0.03
SMAD6O43541 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.24■□□□□ 0.03
SMAD6O43541 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.24■□□□□ 0.03
SMAD6O43541 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SMAD6O43541 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.24■□□□□ 0.03
SMAD6O43541 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.24■□□□□ 0.03
SMAD6O43541 MIR4683-201ENST00000579659 81 ntBASIC15.24■□□□□ 0.03
SMAD6O43541 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.24■□□□□ 0.03
SMAD6O43541 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.24■□□□□ 0.03
SMAD6O43541 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SMAD6O43541 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SMAD6O43541 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.24■□□□□ 0.03
SMAD6O43541 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SMAD6O43541 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SMAD6O43541 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD6O43541 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.23■□□□□ 0.03
SMAD6O43541 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SMAD6O43541 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.23■□□□□ 0.03
SMAD6O43541 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SMAD6O43541 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.23■□□□□ 0.03
SMAD6O43541 AL513477.1-201ENST00000602865 2407 ntBASIC15.23■□□□□ 0.03
SMAD6O43541 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.23■□□□□ 0.03
SMAD6O43541 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SMAD6O43541 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SMAD6O43541 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 AC004945.1-201ENST00000416738 983 ntBASIC15.23■□□□□ 0.03
SMAD6O43541 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.23■□□□□ 0.03
SMAD6O43541 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.23■□□□□ 0.03
SMAD6O43541 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SMAD6O43541 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.23■□□□□ 0.03
SMAD6O43541 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.23■□□□□ 0.03
SMAD6O43541 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.23■□□□□ 0.03
SMAD6O43541 RN7SL219P-201ENST00000582872 296 ntBASIC15.23■□□□□ 0.03
SMAD6O43541 AC138696.2-201ENST00000607376 223 ntBASIC15.23■□□□□ 0.03
SMAD6O43541 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.23■□□□□ 0.03
SMAD6O43541 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.23■□□□□ 0.03
SMAD6O43541 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 AP000593.2-201ENST00000542775 1433 ntBASIC15.23■□□□□ 0.03
SMAD6O43541 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SMAD6O43541 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.23■□□□□ 0.03
SMAD6O43541 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
SMAD6O43541 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SMAD6O43541 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SMAD6O43541 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.23■□□□□ 0.03
SMAD6O43541 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD6O43541 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SMAD6O43541 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 AL138725.1-201ENST00000407347 1314 ntBASIC15.22■□□□□ 0.03
SMAD6O43541 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SMAD6O43541 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD6O43541 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD6O43541 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
SMAD6O43541 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms