Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSI1O43347 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSI1O43347 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSI1O43347 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
MSI1O43347 ZBED1P1-201ENST00000502364 1930 ntBASIC15.72■□□□□ 0.11
MSI1O43347 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
MSI1O43347 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSI1O43347 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
MSI1O43347 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSI1O43347 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSI1O43347 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
MSI1O43347 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
MSI1O43347 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
MSI1O43347 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MSI1O43347 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.71■□□□□ 0.11
MSI1O43347 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.71■□□□□ 0.11
MSI1O43347 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MSI1O43347 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.71■□□□□ 0.11
MSI1O43347 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.71■□□□□ 0.11
MSI1O43347 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.71■□□□□ 0.11
MSI1O43347 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
MSI1O43347 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MSI1O43347 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MSI1O43347 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.71■□□□□ 0.11
MSI1O43347 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
MSI1O43347 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.71■□□□□ 0.11
MSI1O43347 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MSI1O43347 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.71■□□□□ 0.11
MSI1O43347 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.71■□□□□ 0.11
MSI1O43347 RPS2P32-201ENST00000439199 892 ntBASIC15.71■□□□□ 0.11
MSI1O43347 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.71■□□□□ 0.11
MSI1O43347 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.71■□□□□ 0.11
MSI1O43347 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.71■□□□□ 0.11
MSI1O43347 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.71■□□□□ 0.11
MSI1O43347 AC006453.4-201ENST00000636949 1252 ntBASIC15.71■□□□□ 0.11
MSI1O43347 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 AL354989.2-201ENST00000435838 1540 ntBASIC15.71■□□□□ 0.11
MSI1O43347 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.71■□□□□ 0.11
MSI1O43347 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
MSI1O43347 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.71■□□□□ 0.11
MSI1O43347 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.71■□□□□ 0.11
MSI1O43347 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MSI1O43347 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
MSI1O43347 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MSI1O43347 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MSI1O43347 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
MSI1O43347 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
MSI1O43347 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.71■□□□□ 0.1
MSI1O43347 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MSI1O43347 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.7■□□□□ 0.1
MSI1O43347 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
MSI1O43347 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 CLUHP2-201ENST00000426660 1303 ntBASIC15.7■□□□□ 0.1
MSI1O43347 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MSI1O43347 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
MSI1O43347 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
MSI1O43347 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MSI1O43347 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.7■□□□□ 0.1
MSI1O43347 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.7■□□□□ 0.1
MSI1O43347 AC023090.2-201ENST00000625182 2110 ntBASIC15.7■□□□□ 0.1
MSI1O43347 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.7■□□□□ 0.1
MSI1O43347 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 AC067930.6-201ENST00000623257 4947 ntBASIC15.7■□□□□ 0.1
MSI1O43347 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.7■□□□□ 0.1
MSI1O43347 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.7■□□□□ 0.1
MSI1O43347 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.7■□□□□ 0.1
MSI1O43347 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
MSI1O43347 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.7■□□□□ 0.1
MSI1O43347 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.7■□□□□ 0.1
MSI1O43347 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.7■□□□□ 0.1
MSI1O43347 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.7■□□□□ 0.1
MSI1O43347 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MSI1O43347 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MSI1O43347 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.7■□□□□ 0.1
MSI1O43347 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms