Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
CLOCKO15516 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CLOCKO15516 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 AP001267.2-201ENST00000532619 2086 ntBASIC14.5□□□□□ -0.09
CLOCKO15516 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.5□□□□□ -0.09
CLOCKO15516 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 GHSR-202ENST00000427970 912 ntBASIC14.5□□□□□ -0.09
CLOCKO15516 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.5□□□□□ -0.09
CLOCKO15516 HLA-J-203ENST00000494367 1087 ntBASIC14.5□□□□□ -0.09
CLOCKO15516 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.5□□□□□ -0.09
CLOCKO15516 AC093520.2-201ENST00000561830 333 ntBASIC14.5□□□□□ -0.09
CLOCKO15516 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.5□□□□□ -0.09
CLOCKO15516 AC027307.2-201ENST00000591252 911 ntBASIC14.5□□□□□ -0.09
CLOCKO15516 AC009093.7-201ENST00000623853 1223 ntBASIC14.5□□□□□ -0.09
CLOCKO15516 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 AC008267.7-201ENST00000624570 1194 ntBASIC14.5□□□□□ -0.09
CLOCKO15516 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CLOCKO15516 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.5□□□□□ -0.09
CLOCKO15516 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.5□□□□□ -0.09
CLOCKO15516 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
CLOCKO15516 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CLOCKO15516 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CLOCKO15516 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.49□□□□□ -0.09
CLOCKO15516 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.49□□□□□ -0.09
CLOCKO15516 AC136604.1-201ENST00000418535 575 ntBASIC14.49□□□□□ -0.09
CLOCKO15516 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.49□□□□□ -0.09
CLOCKO15516 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.49□□□□□ -0.09
CLOCKO15516 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.49□□□□□ -0.09
CLOCKO15516 AL139010.1-201ENST00000454878 894 ntBASIC14.49□□□□□ -0.09
CLOCKO15516 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 AC243562.1-201ENST00000560672 389 ntBASIC14.49□□□□□ -0.09
CLOCKO15516 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
CLOCKO15516 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CLOCKO15516 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms