Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
E2F3O00716 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
E2F3O00716 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
E2F3O00716 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.81□□□□□ -0.04
E2F3O00716 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
E2F3O00716 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 AC097359.2-201ENST00000604992 2389 ntBASIC14.81□□□□□ -0.04
E2F3O00716 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
E2F3O00716 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
E2F3O00716 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
E2F3O00716 AL137783.1-201ENST00000623494 1896 ntBASIC14.8□□□□□ -0.04
E2F3O00716 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
E2F3O00716 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.8□□□□□ -0.04
E2F3O00716 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
E2F3O00716 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
E2F3O00716 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
E2F3O00716 AL645937.2-201ENST00000396808 931 ntBASIC14.8□□□□□ -0.04
E2F3O00716 DGCR5-201ENST00000399539 862 ntBASIC14.8□□□□□ -0.04
E2F3O00716 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.8□□□□□ -0.04
E2F3O00716 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
E2F3O00716 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
E2F3O00716 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.8□□□□□ -0.04
E2F3O00716 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.8□□□□□ -0.04
E2F3O00716 INE1-201ENST00000456273 945 ntBASIC14.8□□□□□ -0.04
E2F3O00716 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.8□□□□□ -0.04
E2F3O00716 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.8□□□□□ -0.04
E2F3O00716 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.8□□□□□ -0.04
E2F3O00716 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
E2F3O00716 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.8□□□□□ -0.04
E2F3O00716 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.8□□□□□ -0.04
E2F3O00716 TPRX2P-201ENST00000535362 881 ntBASIC14.8□□□□□ -0.04
E2F3O00716 WASH4P-201ENST00000564273 1246 ntBASIC14.8□□□□□ -0.04
E2F3O00716 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
E2F3O00716 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
E2F3O00716 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.8□□□□□ -0.04
E2F3O00716 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
E2F3O00716 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
E2F3O00716 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.8□□□□□ -0.04
E2F3O00716 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.8□□□□□ -0.04
E2F3O00716 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.79□□□□□ -0.04
E2F3O00716 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.79□□□□□ -0.04
E2F3O00716 VDAC1P7-201ENST00000462417 847 ntBASIC14.79□□□□□ -0.04
E2F3O00716 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.79□□□□□ -0.04
E2F3O00716 AP001267.2-201ENST00000532619 2086 ntBASIC14.79□□□□□ -0.04
E2F3O00716 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
E2F3O00716 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
E2F3O00716 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.79□□□□□ -0.04
E2F3O00716 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.79□□□□□ -0.04
E2F3O00716 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.79□□□□□ -0.04
E2F3O00716 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.79□□□□□ -0.04
E2F3O00716 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.79□□□□□ -0.04
E2F3O00716 BX640514.1-201ENST00000583223 1918 ntBASIC14.79□□□□□ -0.04
E2F3O00716 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.79□□□□□ -0.04
E2F3O00716 INTS4P1-203ENST00000641008 3683 ntBASIC14.79□□□□□ -0.04
E2F3O00716 MIR600HG-201ENST00000449175 5984 ntBASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms