Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.17■□□□□ 0.18
O00370 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.17■□□□□ 0.18
O00370 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 LILRP1-201ENST00000444199 1370 ntBASIC16.17■□□□□ 0.18
O00370 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
O00370 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.17■□□□□ 0.18
O00370 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
O00370 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.17■□□□□ 0.18
O00370 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.17■□□□□ 0.18
O00370 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
O00370 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
O00370 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
O00370 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.17■□□□□ 0.18
O00370 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.17■□□□□ 0.18
O00370 AC007389.4-201ENST00000454674 793 ntBASIC16.17■□□□□ 0.18
O00370 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.17■□□□□ 0.18
O00370 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.17■□□□□ 0.18
O00370 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
O00370 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.17■□□□□ 0.18
O00370 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.17■□□□□ 0.18
O00370 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.17■□□□□ 0.18
O00370 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
O00370 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
O00370 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.17■□□□□ 0.18
O00370 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.17■□□□□ 0.18
O00370 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
O00370 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.17■□□□□ 0.18
O00370 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
O00370 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.16■□□□□ 0.18
O00370 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.16■□□□□ 0.18
O00370 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
O00370 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
O00370 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.16■□□□□ 0.18
O00370 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.16■□□□□ 0.18
O00370 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
O00370 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.16■□□□□ 0.18
O00370 CICP14-201ENST00000629111 2732 ntBASIC16.16■□□□□ 0.18
O00370 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.16■□□□□ 0.18
O00370 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.16■□□□□ 0.18
O00370 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.16■□□□□ 0.18
O00370 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.16■□□□□ 0.18
O00370 AC012441.1-201ENST00000446669 685 ntBASIC16.16■□□□□ 0.18
O00370 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.16■□□□□ 0.18
O00370 TDH-203ENST00000531764 1110 ntBASIC16.16■□□□□ 0.18
O00370 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.16■□□□□ 0.18
O00370 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.16■□□□□ 0.18
O00370 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.16■□□□□ 0.18
O00370 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.16■□□□□ 0.18
O00370 FLJ16779-201ENST00000612722 7638 ntBASIC16.16■□□□□ 0.18
O00370 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.16■□□□□ 0.18
O00370 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
O00370 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.16■□□□□ 0.18
O00370 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.16■□□□□ 0.18
O00370 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
O00370 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms