Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC015910.1-201ENST00000579400 975 ntBASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TMX2-CTNND1H3BSU7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC134407.2-201ENST00000625089 1978 ntBASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 CICP20-201ENST00000443330 2801 ntBASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 DRD5P1-201ENST00000456605 1438 ntBASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 KRT90P-201ENST00000549264 1064 ntBASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 AP005019.2-201ENST00000615104 511 ntBASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.96□□□□□ -0.01
TMX2-CTNND1H3BSU7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TMX2-CTNND1H3BSU7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TMX2-CTNND1H3BSU7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TMX2-CTNND1H3BSU7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TMX2-CTNND1H3BSU7 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.96□□□□□ -0.02
TMX2-CTNND1H3BSU7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TMX2-CTNND1H3BSU7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
TMX2-CTNND1H3BSU7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TMX2-CTNND1H3BSU7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TMX2-CTNND1H3BSU7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 AL607033.1-201ENST00000623900 1599 ntBASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TMX2-CTNND1H3BSU7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms