Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 AC003686.1-201ENST00000550956 1034 ntBASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 CR392039.1-201ENST00000623217 204 ntBASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM88BA6NKF7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 BPIFB5P-201ENST00000457066 1099 ntBASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 AC008026.2-201ENST00000495438 348 ntBASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 AC092612.1-201ENST00000514501 998 ntBASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 SIGLEC22P-201ENST00000599104 714 ntBASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 AC008972.2-201ENST00000606587 494 ntBASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 AC012313.1-201ENST00000593393 3059 ntBASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
TMEM88BA6NKF7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 AC009145.4-201ENST00000625119 1294 ntBASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 AC110057.1-201ENST00000636031 898 ntBASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM88BA6NKF7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM88BA6NKF7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms