Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 IKZF4-203ENST00000547167 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC7.75□□□□□ -1.17
LINC01558Q9Y6Z2 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 FP325332.1-201ENST00000624818 2045 ntBASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PPP1R26P1-201ENST00000474415 3613 ntBASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MMP23A-201ENST00000234610 1017 ntBASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 RAC2-202ENST00000401529 569 ntTSL 4 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TERC-201ENST00000602385 541 ntBASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AC092368.3-202ENST00000574180 1591 ntBASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 AL590440.2-201ENST00000641973 1595 ntBASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
LINC01558Q9Y6Z2 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms