Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 WASH3P-207ENST00000560956 1394 ntBASIC15.7■□□□□ 0.1
YIPF1Q9Y548 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 PAUPAR-201ENST00000630360 2965 ntBASIC15.7■□□□□ 0.1
YIPF1Q9Y548 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
YIPF1Q9Y548 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 AC011742.3-201ENST00000439053 820 ntBASIC15.69■□□□□ 0.1
YIPF1Q9Y548 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 AC104073.2-201ENST00000453737 312 ntBASIC15.69■□□□□ 0.1
YIPF1Q9Y548 RNA5SP423-201ENST00000517127 109 ntBASIC15.69■□□□□ 0.1
YIPF1Q9Y548 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 MIR3619-201ENST00000579667 83 ntBASIC15.69■□□□□ 0.1
YIPF1Q9Y548 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 RN7SL163P-201ENST00000583100 276 ntBASIC15.69■□□□□ 0.1
YIPF1Q9Y548 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 AC132192.2-201ENST00000596206 1147 ntBASIC15.69■□□□□ 0.1
YIPF1Q9Y548 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 AC091544.8-201ENST00000619490 361 ntBASIC15.69■□□□□ 0.1
YIPF1Q9Y548 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.69■□□□□ 0.1
YIPF1Q9Y548 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF1Q9Y548 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 TUBBP5-203ENST00000508529 1334 ntBASIC15.68■□□□□ 0.1
YIPF1Q9Y548 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 AC006058.4-201ENST00000624016 1670 ntBASIC15.68■□□□□ 0.1
YIPF1Q9Y548 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 RN7SL11P-201ENST00000471305 293 ntBASIC15.68■□□□□ 0.1
YIPF1Q9Y548 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 AC005324.6-201ENST00000587972 613 ntBASIC15.68■□□□□ 0.1
YIPF1Q9Y548 AC026740.1-201ENST00000607068 791 ntBASIC15.68■□□□□ 0.1
YIPF1Q9Y548 AC068587.8-201ENST00000641239 219 ntBASIC15.68■□□□□ 0.1
YIPF1Q9Y548 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF1Q9Y548 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms