Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 AC009118.2-201ENST00000613275 655 ntBASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 BX539320.1-201ENST00000623759 877 ntBASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 SLC7A15P-201ENST00000424028 1363 ntBASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VPS29Q9UBQ0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AC026748.1-201ENST00000624349 3251 ntBASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 INTS4P2-202ENST00000614726 2019 ntBASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AC005089.1-201ENST00000619486 2241 ntBASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AL365209.1-201ENST00000624418 6473 ntBASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS29Q9UBQ0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS29Q9UBQ0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms