Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 AL138725.1-201ENST00000407347 1314 ntBASIC16.23■□□□□ 0.19
CNTN3Q9P232 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 BTBD6P1-201ENST00000412176 1267 ntBASIC16.23■□□□□ 0.19
CNTN3Q9P232 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 AL591846.1-201ENST00000451736 433 ntBASIC16.23■□□□□ 0.19
CNTN3Q9P232 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 MIR4525-201ENST00000580000 75 ntBASIC16.23■□□□□ 0.19
CNTN3Q9P232 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 AC091271.1-201ENST00000611877 1162 ntBASIC16.23■□□□□ 0.19
CNTN3Q9P232 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 ZBED1P1-201ENST00000502364 1930 ntBASIC16.23■□□□□ 0.19
CNTN3Q9P232 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CNTN3Q9P232 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.23■□□□□ 0.19
CNTN3Q9P232 FAM45BP-202ENST00000592932 1624 ntBASIC16.23■□□□□ 0.19
CNTN3Q9P232 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 INE2-201ENST00000630399 1874 ntBASIC16.22■□□□□ 0.19
CNTN3Q9P232 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 AC007969.1-201ENST00000433675 447 ntBASIC16.22■□□□□ 0.19
CNTN3Q9P232 HIST2H2BB-201ENST00000449108 381 ntBASIC16.22■□□□□ 0.19
CNTN3Q9P232 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 AC005695.3-201ENST00000614522 232 ntBASIC16.22■□□□□ 0.19
CNTN3Q9P232 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 AC244157.2-201ENST00000616239 1006 ntBASIC16.22■□□□□ 0.19
CNTN3Q9P232 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.22■□□□□ 0.19
CNTN3Q9P232 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 AC003102.2-201ENST00000589195 1469 ntBASIC16.22■□□□□ 0.19
CNTN3Q9P232 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CNTN3Q9P232 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CNTN3Q9P232 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CNTN3Q9P232 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTN3Q9P232 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CNTN3Q9P232 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CNTN3Q9P232 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CNTN3Q9P232 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CNTN3Q9P232 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTN3Q9P232 ACE3P-201ENST00000423435 1973 ntBASIC16.21■□□□□ 0.19
CNTN3Q9P232 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.21■□□□□ 0.19
CNTN3Q9P232 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CNTN3Q9P232 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNTN3Q9P232 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CNTN3Q9P232 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.21■□□□□ 0.19
CNTN3Q9P232 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CNTN3Q9P232 TLE1P1-201ENST00000422965 589 ntBASIC16.21■□□□□ 0.19
CNTN3Q9P232 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms