Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 AL360270.3-201ENST00000609118 1348 ntBASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 AC092933.1-201ENST00000393644 945 ntBASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 HLA-K-203ENST00000430151 1046 ntBASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 TNRC18P2-201ENST00000417666 2714 ntBASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 MIR600HG-201ENST00000449175 5984 ntBASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 ZBED1P1-201ENST00000502364 1930 ntBASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.72□□□□□ -0.05
CUEDC1Q9NWM3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 TMEM14DP-201ENST00000422205 345 ntBASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 AC093433.1-201ENST00000458048 571 ntBASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 AP001063.1-201ENST00000568332 529 ntBASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 MIR5189-201ENST00000577370 114 ntBASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 RN7SL275P-201ENST00000582762 335 ntBASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CUEDC1Q9NWM3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms