Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AL512356.2-201ENST00000546955 174 ntBASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AL121894.2-201ENST00000602977 491 ntBASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AC000095.1-201ENST00000603208 874 ntBASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 AC018665.1-201ENST00000622927 1362 ntBASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CDC42SE2Q9NRR3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CDC42SE2Q9NRR3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms