Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
PCDH11YQ9BZA8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH11YQ9BZA8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH11YQ9BZA8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH11YQ9BZA8 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC19.35■□□□□ 0.69
PCDH11YQ9BZA8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH11YQ9BZA8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCDH11YQ9BZA8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.35■□□□□ 0.69
PCDH11YQ9BZA8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 RPS9P1-201ENST00000419943 583 ntBASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 XBP1P1-201ENST00000436573 652 ntBASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 LINC01783-202ENST00000614408 828 ntBASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 BX284668.2-205ENST00000619677 828 ntBASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 AC018629.1-201ENST00000623381 1736 ntBASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCDH11YQ9BZA8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 AL365203.3-201ENST00000609742 2057 ntBASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 AP000356.3-201ENST00000382243 753 ntBASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 AP002803.1-201ENST00000528836 498 ntBASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 MIR3188-201ENST00000583494 85 ntBASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 AC005632.3-201ENST00000605544 308 ntBASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 AC007881.3-201ENST00000608897 607 ntBASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCDH11YQ9BZA8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 AC087481.3-201ENST00000602886 1894 ntBASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 MROH4P-201ENST00000431302 1578 ntBASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCDH11YQ9BZA8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 REXO1L2P-201ENST00000425429 2069 ntBASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 DNM1P30-201ENST00000563586 452 ntBASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 MIR6842-201ENST00000612539 65 ntBASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 AC015909.3-201ENST00000572855 1794 ntBASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH11YQ9BZA8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms