Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 LINC00634-202ENST00000505157 222 ntBASIC17.04■□□□□ 0.32
PTPN18Q99952 GCOM2-201ENST00000509133 1104 ntBASIC17.04■□□□□ 0.32
PTPN18Q99952 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN18Q99952 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN18Q99952 NUDT4P2-201ENST00000578341 546 ntBASIC17.04■□□□□ 0.32
PTPN18Q99952 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN18Q99952 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.04■□□□□ 0.32
PTPN18Q99952 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN18Q99952 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.04■□□□□ 0.32
PTPN18Q99952 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN18Q99952 AC244250.3-201ENST00000620749 366 ntBASIC17.04■□□□□ 0.32
PTPN18Q99952 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTPN18Q99952 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
PTPN18Q99952 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN18Q99952 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN18Q99952 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN18Q99952 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN18Q99952 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN18Q99952 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PTPN18Q99952 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTPN18Q99952 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN18Q99952 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN18Q99952 ZBED1P1-201ENST00000502364 1930 ntBASIC17.04■□□□□ 0.32
PTPN18Q99952 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PTPN18Q99952 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN18Q99952 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN18Q99952 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
PTPN18Q99952 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 AC023090.2-201ENST00000625182 2110 ntBASIC17.03■□□□□ 0.32
PTPN18Q99952 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTPN18Q99952 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 SALL4P5-201ENST00000419001 1760 ntBASIC17.03■□□□□ 0.32
PTPN18Q99952 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN18Q99952 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN18Q99952 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN18Q99952 AC092638.2-201ENST00000441105 947 ntBASIC17.03■□□□□ 0.32
PTPN18Q99952 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN18Q99952 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.03■□□□□ 0.32
PTPN18Q99952 AC084752.1-201ENST00000509766 622 ntBASIC17.03■□□□□ 0.32
PTPN18Q99952 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 RN7SL470P-201ENST00000583069 259 ntBASIC17.03■□□□□ 0.32
PTPN18Q99952 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN18Q99952 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN18Q99952 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTPN18Q99952 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN18Q99952 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN18Q99952 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 AC007292.2-201ENST00000593524 1812 ntBASIC17.03■□□□□ 0.32
PTPN18Q99952 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN18Q99952 LILRP1-201ENST00000444199 1370 ntBASIC17.02■□□□□ 0.32
PTPN18Q99952 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN18Q99952 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PTPN18Q99952 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PTPN18Q99952 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN18Q99952 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN18Q99952 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN18Q99952 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN18Q99952 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN18Q99952 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PTPN18Q99952 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN18Q99952 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN18Q99952 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN18Q99952 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN18Q99952 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN18Q99952 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN18Q99952 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN18Q99952 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN18Q99952 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.02■□□□□ 0.32
PTPN18Q99952 AC131206.1-201ENST00000538078 1211 ntBASIC17.02■□□□□ 0.32
PTPN18Q99952 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms