Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PTP4A1Q93096 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PTP4A1Q93096 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 TREML5P-201ENST00000421694 576 ntBASIC13.67□□□□□ -0.22
PTP4A1Q93096 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 DUX4L27-201ENST00000554796 1261 ntBASIC13.67□□□□□ -0.22
PTP4A1Q93096 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 SPDYE12P-201ENST00000618416 771 ntBASIC13.67□□□□□ -0.22
PTP4A1Q93096 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 AL157414.3-201ENST00000624276 1954 ntBASIC13.67□□□□□ -0.22
PTP4A1Q93096 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PTP4A1Q93096 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
PTP4A1Q93096 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 AC087499.5-201ENST00000452760 1342 ntBASIC13.66□□□□□ -0.22
PTP4A1Q93096 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PTP4A1Q93096 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 AC055876.3-201ENST00000431496 288 ntBASIC13.66□□□□□ -0.22
PTP4A1Q93096 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 IGHV3-42-201ENST00000520410 361 ntBASIC13.66□□□□□ -0.22
PTP4A1Q93096 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PTP4A1Q93096 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms