Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
USP9XQ93008 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
USP9XQ93008 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
USP9XQ93008 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
USP9XQ93008 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.96□□□□□ -0.34
USP9XQ93008 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
USP9XQ93008 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.95□□□□□ -0.34
USP9XQ93008 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
USP9XQ93008 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC12.95□□□□□ -0.34
USP9XQ93008 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC12.95□□□□□ -0.34
USP9XQ93008 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.95□□□□□ -0.34
USP9XQ93008 BCL2L12P1-201ENST00000508390 733 ntBASIC12.95□□□□□ -0.34
USP9XQ93008 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.95□□□□□ -0.34
USP9XQ93008 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
USP9XQ93008 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.95□□□□□ -0.34
USP9XQ93008 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
USP9XQ93008 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 AF274858.1-201ENST00000406288 372 ntBASIC12.95□□□□□ -0.34
USP9XQ93008 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.95□□□□□ -0.34
USP9XQ93008 AC026470.1-201ENST00000478038 846 ntBASIC12.95□□□□□ -0.34
USP9XQ93008 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC12.95□□□□□ -0.34
USP9XQ93008 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.95□□□□□ -0.34
USP9XQ93008 AC002044.2-201ENST00000624910 970 ntBASIC12.95□□□□□ -0.34
USP9XQ93008 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.95□□□□□ -0.34
USP9XQ93008 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
USP9XQ93008 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.95□□□□□ -0.34
USP9XQ93008 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
USP9XQ93008 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.95□□□□□ -0.34
USP9XQ93008 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC12.94□□□□□ -0.34
USP9XQ93008 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 RNF165-205ENST00000588679 2904 ntBASIC12.94□□□□□ -0.34
USP9XQ93008 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
USP9XQ93008 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC12.94□□□□□ -0.34
USP9XQ93008 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC12.94□□□□□ -0.34
USP9XQ93008 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.94□□□□□ -0.34
USP9XQ93008 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.94□□□□□ -0.34
USP9XQ93008 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC12.94□□□□□ -0.34
USP9XQ93008 CYP4F36P-201ENST00000589193 186 ntBASIC12.94□□□□□ -0.34
USP9XQ93008 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.94□□□□□ -0.34
USP9XQ93008 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.94□□□□□ -0.34
USP9XQ93008 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
USP9XQ93008 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
USP9XQ93008 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.94□□□□□ -0.34
USP9XQ93008 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
USP9XQ93008 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
USP9XQ93008 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC12.94□□□□□ -0.34
USP9XQ93008 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.94□□□□□ -0.34
USP9XQ93008 RPL35P9-201ENST00000446059 350 ntBASIC12.94□□□□□ -0.34
USP9XQ93008 AC006122.1-201ENST00000493323 440 ntBASIC12.94□□□□□ -0.34
USP9XQ93008 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.94□□□□□ -0.34
USP9XQ93008 AC011462.4-201ENST00000616866 449 ntBASIC12.94□□□□□ -0.34
USP9XQ93008 MIR6746-201ENST00000620971 63 ntBASIC12.94□□□□□ -0.34
USP9XQ93008 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
USP9XQ93008 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 PRAL-201ENST00000624952 3286 ntBASIC12.94□□□□□ -0.34
USP9XQ93008 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC12.94□□□□□ -0.34
USP9XQ93008 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
USP9XQ93008 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.94□□□□□ -0.34
USP9XQ93008 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
USP9XQ93008 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.93□□□□□ -0.34
USP9XQ93008 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
USP9XQ93008 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.93□□□□□ -0.34
USP9XQ93008 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
USP9XQ93008 AC022211.2-201ENST00000585075 2527 ntBASIC12.93□□□□□ -0.34
USP9XQ93008 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms